 |
Job Description | P64479 | Confidence | 4.99% | Date | Thu Jan 5 12:08:47 GMT 2012 |
Rank | 54 | Aligned Residues | 57 |
% Identity | 18% | Template | c2w2mP_ |
PDB info |
PDB header:hydrolase/receptor | Chain: P: PDB Molecule:proprotein convertase subtilisin/kexin type 9; |
PDBTitle: wt pcsk9-deltac bound to wt egf-a of ldlr
|
Resolution | 2.40 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | |
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Y | V | I | T | V | M | L | H | . |
. |
. |
E | D | T | L | T | E | I | N | E | L | N | N | Y | L | T | R | D | G | F | L | L | T | M | T | D | D | E | G | N | I | H | E | L | G | T | N | T | F | G | L | I | S | T | Q | S | E | E | E | I | R | E | L | V | S |
Query Conservation |   |
  |
|
|
|
|
|   |
|   | . | . | . |
|   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   | . | . |   |   |   |   | . | . | . | . |
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
T | Y | V | V | V | L | K | E | E | T | H | L | S | Q | S | E | R | T | A | R | R | L | Q | A | Q | A | A | R | R | G | Y | L | T | K | I | L | H | V | F | H | . |
. |
G | L | L | P | . |
. |
. |
. |
G | F | L | V | K | M | S | G | D | L | L | E | L | A | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |
| . | . | S | S | S | S | . | . | . | . |  |  |  |  |  |
|
| G | G | G |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . |
|
|  |  | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
. | . | . | 120 | |
|
|
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|