Job Description P64479 Confidence 3.79% Date Thu Jan 5 12:08:47 GMT 2012 Rank 75 Aligned Residues 45 % Identity 24% Template c1smyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase alpha chain; PDBTitle: structural basis for transcription regulation by alarmone2 ppgpp Resolution 2.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		V	R	Y	V	I	T	V	M	L	H	E	D	T	L	T	E	I	N	E	L	N	N	Y	L	T	R	D	.	.	G	F	L	L	T	M	T	D	D	E	G	N	I	H	E	L	G	T
Query Conservation																													.	.
Alig confidence																													.	.
Template Conservation
Template Sequence		G	E	F	V	L	E	P	L	E	R	G	F	G	V	T	L	G	N	P	L	R	R	I	L	L	S	S	I	P	G	T	A	V	T	S	V	Y	I	E	D	V	L	H	E	F	S	T
Template Known Secondary structure											T	T																T	S											S	S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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