Job Description P69367 Confidence 100.00% Date Thu Jan 5 12:11:25 GMT 2012 Rank 1 Aligned Residues 398 % Identity 13% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		S	R	V	S	Q	A	R	N	L	G	K	Y	F	L	L	I	D	N	M	L	V	V	L	G	F	F	V	V	.	.	.	F	P	L	I	S	I	R	F	V	D	Q	M	G	W	A	A	V	M	V	G	I	A	L	G	L	R	Q	F	I	Q	Q	G	L	G	I	F	G	G	A	I	A	D	R	F	G	A	K	P	M
Query Conservation																														.	.	.
Alig confidence																														.	.	.									.
Template Conservation																																									.
Template Sequence		A	E	I	D	P	T	Y	R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	.	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	V	F
Template Known Secondary structure		S																													T	S								T	.	T	S	S	T	T		S	S																											S
Template Predicted Secondary structure																																									.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		I	V	T	G	M	L	M	R	A	A	G	F	A	T	M	.	.	.	.	G	I	A	H	E	P	W	L	L	W	F	S	C	L	L	S	G	L	G	G	T	L	F	D	P	P	R	S	A	L	V	V	K	L	I	R	P	Q	Q	R	G	R	F	F	S	L	L	M	M	Q	D	S	A	G	A	V	I	G	A	L	L
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		L	P	A	G	L	I	L	A	A	A	V	M	L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I	P	P	L	L
Template Known Secondary structure																								S	S	S	S																T										T	T		T	T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		155	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure									.	.																																														.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																																														.	.	.	.	.	.	.	.	.
Query Sequence		G	S	W	L	L	Q	Y	.	.	D	F	R	L	V	C	A	T	G	A	V	L	F	V	L	C	A	A	F	N	A	W	L	L	P	A	W	K	L	S	T	V	R	T	P	V	R	E	G	M	T	R	V	M	R	.	.	.	.	.	.	.	.	.	D	K	R	F	V	T	Y	V	L	T	L	A	G	Y	Y	M	L
Query Conservation									.	.																																														.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L
Template Known Secondary structure									T			S	T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		A	V	Q	V	M	L	M	L	P	I	M	V	N	D	V	A	G	A	P	S	A	V	K	W	M	Y	A	I	E	A	C	L	S	L	T	L	L	Y	P	I	A	R	W	S	E	K	H	F	R	L	E	H	.	.	.	.	.	R	L	M	A	G	L	L	I	M	S	L	S	M	M	P	V	G	M	V	S	G	L	Q
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.
Template Conservation
Template Sequence		R	Y	G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T
Template Known Secondary structure													B	T	T	B	S																																T	S	T	T																				T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		Q	L	F	T	L	I	C	L	F	Y	I	G	S	I	I	A	E	P	A	R	E	T	L	S	A	S	L	A	D	A	R	A	R	G	S	Y	M	G	F	S	R	L	G	L	A	I	.	G	G	A	I	G	Y	I	G	G	G	W	L	F	D	L	G	K	S	A	H	Q	P	E	L	P	W	M	M	L	G	I	I	G
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		V	D	M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V
Template Known Secondary structure															T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	T	F	L	A	L	G	W	Q	F	S	Q	K	R	A	A	R	R	L	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	L	I	V	V	M	I	G	E	K	R	R	H	E	Q	L	L	Q	E	L	V	P
Template Known Secondary structure																	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions