Job Description P69367 Confidence 2.10% Date Thu Jan 5 12:11:25 GMT 2012 Rank 27 Aligned Residues 184 % Identity 15% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	S	Q	A	R	N	L	G	K	Y	F	L	L	I	D	N	M	L	V	V	L	G	F	F	V	V	F	P	L	I	S	I	R	F	V	D	Q	M	G	W	A	A	V	M	V	G	I	A	L	G	L	R	Q	F	I	Q	Q	G	L	G	I	F	G	G	A	I	A	D	R	F	G	A	K	P	M	I	V	T	G
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		E	E	Y	S	I	E	P	H	S	I	P	L	T	L	I	G	A	A	L	L	W	F	G	W	F	G	F	N	G	G	S	A	.	.	.	.	.	.	.	.	L	A	A	N	D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I
Template Known Secondary structure		T	T	S					S																						G	G	G	.	.	.	.	.	.	.	.	S	S	S	S																													S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		M	L	M	R	A	A	G	F	A	T	M	G	I	A	H	E	P	W	L	L	W	F	S	C	L	L	S	G	L	G	G	T	L	F	D	P	P	R	S	A	L	V	V	K	L	I	R	P	Q	Q	R	G	R	F	F	S	L	L	M	M	Q	D	S	A	G	A	V	I	G	A	L	L	G	S	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																								.																							.																													.	.	.	.	.	.
Template Conservation																								.																							.
Template Sequence		V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K	G	.	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I	K	K	.	K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y
Template Known Secondary structure													T	T	T	T	T	T						.																						T	.	T				T	T																											S
Template Predicted Secondary structure																								.																							.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
												157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	W	L	L	Q	Y	D	F	R	L	V	C	A	T	G	A	V	L	F	V	L	C	A	A	F	N	A	W	L	L	P	A	W	K	L	S	T	V	R	T	P
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V	G	L	R	V	S	S	Q	E	E	Y
Template Known Secondary structure				G	G	G	T																																		T		S	B
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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