Job Description P0A7L3 Confidence 100.00% Date Thu Jan 5 11:05:51 GMT 2012 Rank 3 Aligned Residues 116 % Identity 47% Template c3bboS_ PDB info PDB header:ribosome Chain: S: PDB Molecule:ribosomal protein l20; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome Resolution 9.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		M	A	R	V	K	R	G	V	I	A	R	A	R	H	K	K	I	L	K	Q	A	K	G	Y	Y	G	A	R	S	R	V	Y	R	V	A	F	Q	A	V	I	K	A	G	Q	Y	A	Y	R	D	R	R	Q	R	K	R	Q	F	R	Q	L	W	I	A	R	I	N	A	A	A	R	Q	N	G	I	.	.	S	Y	S	K
Query Conservation																																																																												.	.
Alig confidence																																																																												.	.
Template Conservation
Template Sequence		M	T	R	V	K	R	G	Y	I	A	R	R	R	R	K	K	I	R	F	F	A	S	S	F	R	G	A	H	S	R	L	T	R	T	I	A	Q	Q	K	I	R	A	L	V	S	A	H	R	D	R	D	R	Q	K	R	D	F	R	R	L	W	I	T	R	I	N	A	A	I	R	E	R	G	V	Y	Y	N	Y	S	K
Template Known Secondary structure					S			T	T														S	S		S	S	S	T	T	S	S									T																														T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	N	G	L	K	K	A	S	V	E	I	D	R	K	I	L	A	D	I	A	V	F	D	K	V	A	F	T	A	L	V	E	K	A	K	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	H	D	L	Y	K	R	Q	L	L	L	N	R	K	I	L	A	Q	I	A	I	L	N	P	N	C	I	Y	M	I	Y	N	E	I	I	K	K
Template Known Secondary structure										T				S		S	S	G	G	G	G	T	T	S		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions