Job Description P0A8Z7 Confidence 99.85% Date Thu Jan 5 11:09:02 GMT 2012 Rank 61 Aligned Residues 186 % Identity 16% Template c3mveB_ PDB info PDB header:lyase Chain: B: PDB Molecule:upf0255 protein vv1_0328; PDBTitle: crystal structure of a novel pyruvate decarboxylase Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		S	T	L	L	Y	L	H	G	F	N	S	S	P	R	S	A	K	A	S	L	L	K	N	W	L	A	E	H	H	P	D	V	E	M	I	I	P	Q	L	P	P	Y	P	S	.	.	.	.	.	.	.	.	.	.	.	D	A	A	E	L	L	E	S	I	V	L	E	H	G	.	.	.	G	D	S	L	G	I	V	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																				.												.	.													.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation																				.												.	.
Template Sequence		P	V	V	I	V	S	A	G	L	D	S	L	Q	T	D	M	W	R	.	L	F	R	D	H	L	A	K	H	D	I	.	.	A	M	L	T	V	D	M	P	S	V	G	Y	S	S	K	Y	P	L	T	E	D	Y	S	R	L	H	Q	A	V	L	N	E	L	F	S	I	P	Y	V	D	H	H	R	V	G	L	I	G
Template Known Secondary structure										T	T	S		G	G	G				.				T	T	G	G	G	G	T		.	.								T	T	S	G	G	G	T	T	S				S		T	T										G	G	G		T	T
Template Predicted Secondary structure																				.												.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		S	S	L	G	G	Y	Y	A	T	W	L	S	Q	C	F	M	L	P	A	V	V	V	N	P	A	V	R	.	.	.	.	.	.	.	.	.	.	P	F	E	L	L	T	D	Y	L	G	Q	N	E	N	P	Y	T	G	Q	Q	Y	V	L	E	S	R	H	I	Y	D	L	K	V	M	Q	.	.	.	.	.	.	I	D
Query Conservation																													.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	F	G	G	N	A	M	V	R	L	S	F	L	E	Q	E	K	I	K	A	C	V	I	L	G	A	P	I	H	D	I	F	A	S	P	Q	K	L	Q	Q	M	P	K	M	Y	L	D	V	L	A	S	R	L	G	K	S	V	V	D	I	Y	S	L	S	G	Q	M	A	A	W	S	L	K	V	Q	G	F	L	S
Template Known Secondary structure			T													T	G	G	G								S				S										T	T	S												T	T		S											G	G	G	G		T	T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		P	L	E	A	P	D	L	I	W	L	L	Q	Q	T	G	D	E	V	L	D	Y	R	Q	A	V	A	Y	Y	.	.	.	A	S	C	R	Q	T	V	I	E	G	G	N	H	A	F	T	G	F	E	D	Y	F	N	P	I	V	D	F	L	G	L	H
Query Conservation																														.	.	.
Alig confidence																														.	.	.														.
Template Conservation																																														.
Template Sequence		S	R	K	T	K	V	P	I	L	A	M	S	L	E	G	D	P	V	S	P	Y	S	D	N	Q	M	V	A	F	F	S	T	Y	G	K	A	K	K	I	S	S	K	T	I	.	T	Q	G	Y	E	Q	S	L	D	L	A	I	K	W	L	E	D	E
Template Known Secondary structure		S	S		B	S	S								T	T		S	S	S											T	B	T	T								S	S		S	.	T	T	S
Template Predicted Secondary structure																																														.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions