Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8Z7
Confidence99.84%DateThu Jan 5 11:09:02 GMT 2012
Rank74Aligned Residues183
% Identity16%Templatec3kxpD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:alpha-(n-acetylaminomethylene)succinic acid PDBTitle: crystal structure of e-2-(acetamidomethylene)succinate2 hydrolase
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.... .....50.........60.........70
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Query Sequence  STLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP. . . . . . . . . . . SDAAELLESIVLEHGGDSLGIVGSSL
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Template Sequence  PLXLFFHGITSNSAVFE. . PLXIRLSD. . . RFTTIAVDQRGHGLSDKPETGYEANDYADDIAGLIRTLARGHAILVGHSL
Template Known Secondary structure  S

TT

GGGG..TTTTT...TS

TTSTTS


SS

S
SSST
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   33......40......... 50....... ..60.........70.........80.........90.........100.......
 
   71........80.........90.........100.........110.........120.....
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Query Sequence  GGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDL. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPV
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TTTS

S


T



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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   126...130.........140.........150...... ...160.........170.... .....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . KVMQIDPLEAPDLIWLLQQTGDEVLDYRQAV. . . AYYASCRQTVIEGGNHAF. . TGFED
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Template Sequence  DGGLRPLASSAAXAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPGADHYVNEVSPEI
Template Known Secondary structure  TTSS
TTS



S
TT
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S

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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   180.........
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Query Sequence  YFNPIVDFLG
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Template Sequence  TLKAITNFID
Template Known Secondary structure  T
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   268.270.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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