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Job DescriptionP0A8Z7
Confidence99.81%DateThu Jan 5 11:09:02 GMT 2012
Rank94Aligned Residues183
% Identity11%Templatec3gzjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:polyneuridine-aldehyde esterase; PDBTitle: crystal structure of polyneuridine aldehyde esterase2 complexed with 16-epi-vellosimine
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.... .....50.........60.........
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Query Sequence  TLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP. . . . . . . . . . . . . SDAAELLESIVLEHGGDSLGIVGSS
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Template Sequence  HFVLVHGGCLGAWIWY. . KLKPLLESAGH. . KVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHS
Template Known Secondary structure 

TT

GGGGT..TTTT
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TTSTT
S

GGG

STS
TT

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   12.......20....... ..30........ .40.........50.........60.........70.........80.......
 
   70.........80.........90.........100.........110.
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Query Sequence  LGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMF
Template Known Secondary structure  T
GGG



TTS
TTGGGS
TTTTTT
SSSS

TS
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   112.......120.........130.........140.........150...... ...160.........170....
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Query Sequence  . . . . . . . . . . . . . GQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAV. . . AYYASCRQTVIEGGNHAF.
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Template Sequence  QNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADAMGM
Template Known Secondary structure  TTS



B


TS



TTTGGGSTT
SSS
T

STT

S
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   175....180.........
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Query Sequence  . TGFEDYFNPIVDFLG
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Template Sequence  LSQPREVCKCLLDISD
Template Known Secondary structure  S
Template Predicted Secondary structure 



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   248.250.........260...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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