Job Description P0A8Z7 Confidence 99.76% Date Thu Jan 5 11:09:02 GMT 2012 Rank 132 Aligned Residues 183 % Identity 16% Template c3ds8A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2722 protein; PDBTitle: the crysatl structure of the gene lin2722 products from listeria2 innocua Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																														.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	Y	L	H	G	F	N	S	S	P	R	S	A	K	A	S	L	L	K	N	W	L	A	E	H	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	E	M	I	I	P	Q	L	P	P	Y	P	S	D	A	A	E	L	L	E	S	I
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		I	I	L	I	H	G	S	G	G	N	A	S	S	L	D	.	.	K	X	A	D	Q	L	X	N	E	Y	R	S	S	N	E	A	L	T	X	T	V	N	S	E	G	K	I	K	F	E	G	K	L	T	K	D	A	K	R	P	I	I	K	F	G	F	E	Q	N	Q	A	T	P	D	D	W	S	K	W	L	K	I	A
Template Known Secondary structure								T	T			T	T	T	T		.	.									T	T													T	T	T						S				T	T		S	S								S	S	T	T	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		55	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																												.	.	.	.
Query SS confidence						.	.	.	.																												.	.	.	.
Query Sequence		V	L	E	H	.	.	.	.	G	G	D	S	L	G	I	V	G	S	S	L	G	G	Y	Y	A	T	W	L	S	Q	C	F	M	L	P	.	.	.	.	A	V	V	V	N	P	A	V	R	P	F	E	L	L	T	D	Y	L	G	Q	N	E	N	P	Y	T	G	Q	Q	Y	V	L	E	S	R	H	I	Y	D	L	K
Query Conservation						.	.	.	.																												.	.	.	.
Alig confidence						.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		X	E	D	L	K	S	R	Y	G	F	T	Q	X	D	G	V	G	H	S	N	G	G	L	A	L	T	Y	Y	A	E	D	Y	A	G	D	K	T	V	P	T	L	R	K	L	V	A	I	G	S	P	F	N	D	L	D	P	N	D	N	G	X	D	L	S	F	K	K	L	P	N	S	T	P	Q	X	D	Y	F	I	K
Template Known Secondary structure												S								T													S	T	T		T	T	S										S			T	T		S							S		T	T		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.													.
Query SS confidence																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.													.
Query Sequence		V	M	Q	I	D	P	L	E	A	P	D	L	I	W	L	L	Q	Q	T	G	.	.	.	.	.	.	D	E	V	L	D	Y	R	Q	A	V	A	Y	Y	A	.	.	.	.	.	.	.	.	.	S	C	R	Q	T	V	I	E	G	G	N	H	.	A	F	T	G	F	E	D	Y	F	N	P	I	V	D	F	L	G	L
Query Conservation																						.	.	.	.	.	.															.	.	.	.	.	.	.	.	.													.
Alig confidence			.	.																		.	.	.	.	.	.															.	.	.	.	.	.	.	.	.													.
Template Conservation			.	.
Template Sequence		N	.	.	Q	T	E	V	S	P	D	L	E	V	L	A	I	A	G	E	L	S	E	D	N	P	T	D	G	I	V	P	T	I	S	S	L	A	T	R	L	F	X	P	G	S	A	K	A	Y	I	E	D	I	Q	V	G	E	D	A	V	H	Q	T	L	H	E	T	P	K	S	I	E	K	T	Y	W	F	L	E	K
Template Known Secondary structure		T	.	.	G	G	G	S		T	T										S	B	T	T	B		B		S	S	S	B					T	G	G	G	G	T	S	B	T	T	B	S									S	G	G	G		G	G	G	G	G	G	S													T
Template Predicted Secondary structure			.	.
Template SS confidence
		164			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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