Job Description P0A8Z7 Confidence 97.87% Date Thu Jan 5 11:09:02 GMT 2012 Rank 264 Aligned Residues 78 % Identity 15% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		M	S	T	L	L	Y	L	H	G	F	N	S	S	P	R	S	A	K	A	S	L	L	K	N	W	L	A	E	H	H	P	D	V	E	M	I	I	P	Q	L	P	P	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	A	A	E	L	L	E	S	I	V	L	E	H	.	.	.	.	.	G	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	Q	A	A	K	G	N	Y	G	L	L	D	L	I	Q	A	L	R	W	T	S	E	N	I	G	F	F	G	G	D	P
Template Known Secondary structure											S	S	S	S	S			T	T	T	S										T																	B		S	S	S	S		B																			G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	L	G	I	V	G	S	S	L	G	G	Y	Y	A	T	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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