Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8Z7
Confidence50.32%DateThu Jan 5 11:09:02 GMT 2012
Rank326Aligned Residues81
% Identity19%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40....
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Query Sequence  STLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKAR
Template Known Secondary structure  S


TTSSTT



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TT

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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   45....50.........60.........70.........80..
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Query Sequence  . . . . . . . . . . . . . . . . . . SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCF
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Template Sequence  LEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAF
Template Known Secondary structure  T
S



SS



S
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S
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   178.180.........190.........200.........210.........220.........230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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