Job Description P0A8Z7 Confidence 99.84% Date Thu Jan 5 11:09:02 GMT 2012 Rank 72 Aligned Residues 185 % Identity 16% Template c1pjaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:palmitoyl-protein thioesterase 2 precursor; PDBTitle: the crystal structure of palmitoyl protein thioesterase-2 reveals the2 basis for divergent substrate specificities of the two lysosomal3 thioesterases (ppt1 and ppt2) Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.
Query Sequence		S	T	L	L	Y	L	H	G	F	N	S	S	P	R	S	A	K	A	S	L	L	K	N	W	L	A	E	H	H	P	D	V	E	M	I	I	P	Q	L	P	P	Y	P	S	.	.	.	.	.	.	.	.	.	D	A	A	E	L	L	E	S	I	V	L	E	H	G	G	D	S	L	G	I	V	G	S	S	L	G	G
Query Conservation																																														.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		K	P	V	I	V	V	H	G	L	F	D	S	S	Y	S	F	R	.	.	H	L	L	E	Y	I	N	E	T	H	P	G	T	V	V	T	V	L	D	L	F	D	G	R	E	S	L	R	P	L	W	E	Q	V	Q	G	F	R	E	A	V	V	P	I	M	A	K	A	P	Q	G	V	H	L	I	C	Y	S	Q	G	G
Template Known Secondary structure										T	T			G	G	G	G		.	.										S	T	T								S	S		S	G	G	G	G	S																					T	T								T
Template Predicted Secondary structure																			.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	A	T	W	L	S	Q	C	F	M	L	P	A	V	V	V	N	P	A	V	R	P	F	E	L	L	T	D	Y	L	G	Q	N	E	N	P	Y	T	G	Q	Q	Y	V	L	E	S	R	H	I	Y	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	C	R	A	L	L	S	V	M	D	D	H	N	V	D	S	F	I	S	L	S	S	P	Q	M	G	Q	Y	G	D	T	D	Y	L	K	W	L	F	P	T	S	M	R	S	N	L	Y	R	I	C	Y	S	P	W	G	Q	E	F	S	I	C	N	Y	W	H	D	P	H	H	D	D	L	Y	L	N	A	S	S	F
Template Known Secondary structure												T	T										S			T	T		B		S										T	T											T	S	T	T	G	G	G	S	T	G	G	G	G	B			T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
															126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																														.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	M	Q	I	D	P	L	E	A	P	D	L	I	W	L	L	Q	Q	T	G	D	E	V	L	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	A	V	A	Y	Y	A	S	C	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	L	I	N	G	E	R	D	H	P	N	A	T	V	W	R	K	N	F	L	R	V	G	H	L	V	L	I	G	G	P	D	D	G	V	I	T	P	W	Q	S	S	F	F	G	F	Y	D	A	N	E	T	V	L	E	M	E	E	Q	L	V	Y	L	R	D	S	F	G	L	K	T	L	L	A	R	G	A	I	V
Template Known Secondary structure						T	T	S	S			T	T									T	T		S								T	T		S	S	S	S	S	G	G	G	G	G	T					T	T						G	G	G	S					T	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		Q	T	V	I	E	G	G	N	H	A	F	.	.	T	G	F	E	D	Y	F	N	P	I	V	D	F	L
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		R	C	P	M	A	G	I	S	H	T	A	W	H	S	N	R	T	L	Y	E	T	C	I	E	P	W	L
Template Known Secondary structure						S	S			T	T	T	T	T	S									T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions