|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | R | F | A | R | K | A | D | C | A | A | I | A | E | I | Y | N | H | A | V | L | Y | T | A | A | I | W | N | D | Q | T | V | D | A | D | N | R | I | A | W | F | E | A | R | T | L | A | G | Y | P | V | L | V | S | E | E | N | G | V | V | T | G | Y | A | S | F | G | D | W | R | S | F | D | G | F | R | H | T | V |
Query Conservation |   |
  |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
Template Sequence |   |
H | H | A | D | L | T | L | K | E | L | Y | A | L | L | Q | L | R | T | E | V | F | V | V | E | Q | K | C | P | Y | Q | E | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | D | L | V | G | D | T | H | H | L | X | A | W | R | D | G | Q | L | L | A | Y | L | R | L | L | D | P | V | R | H | E | G | . |
. |
Q | V | V |
Template Known Secondary structure |   |
 | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
|
|
|
| S |
|
| . | . | . | . | . | . | . | . | . | S |
| T | T | S | T | T |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| S | T | T | T | T | T | . | . |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | H | S | V | Y | V | H | P | D | H | Q | G | K | G | L | G | R | K | L | L | S | R | L | I | D | E | A | R | D | C | . |
G | K | H | V | M | V | A | G | I | E | S | Q | N | Q | A | S | L | H | L | H | Q | S | L | G | F | V | V | T | A | Q | M | P | Q | V | G | T | K | F | G | R | W | L | D | L | T | F | M | Q | L |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   | . | . | . |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
| . | . | . |
|   |   |   |   |   |
|
| . | . |   |
|   |   |   |   |   |
Template Sequence |   |
I | G | R | V | V | S | S | S | A | A | R | G | Q | G | L | G | H | Q | L | X | E | R | A | L | Q | A | A | E | R | L | W | L | D | T | P | V | Y | L | S | A | . |
. |
. |
Q | A | H | L | Q | A | Y | Y | G | R | Y | G | F | V | A | V | T | . |
. |
. |
E | V | Y | L | E | D | D | I | . |
. |
P | H | I | G | X | R | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| G | G | G | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | . | . | . |  | S | T | T |  |  |  |  |  | T | T | T |  |  |  |
| S | . | . | . |
|
|  |  |  | T | T |  | . | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
| . | . | . |
|
|  |  |  |
|
|
| . | . |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
. | . | . | . | . | 140 | . | . | |
|
. | . | . | . | . | . | . |
  |
  |   |
161 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
Q |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
A |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
150 |
  |