Job Description P76112 Confidence 99.84% Date Thu Jan 5 12:19:04 GMT 2012 Rank 37 Aligned Residues 139 % Identity 19% Template c3i9sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		M	S	I	R	F	A	R	K	A	D	C	A	A	I	A	E	I	Y	N	H	A	V	L	Y	T	A	A	I	W	N	D	Q	T	V	D	A	D	N	R	I	A	W	F	E	A	R	T	L	A	G	Y	P	V	L	V	S	E	E	N	G	V	V	T	G	Y	A	S	F	G	D	W	R	S	F	D	G	.	F	R	H
Query Conservation																																																																														.
Alig confidence																																																																														.
Template Conservation
Template Sequence		V	E	I	K	R	V	D	K	H	H	C	L	D	L	V	G	I	F	I	E	L	E	R	Y	Y	F	G	D	K	A	A	S	E	Q	D	L	A	N	Y	L	S	H	Q	V	F	S	E	H	S	G	V	K	V	I	A	A	V	E	H	D	K	V	L	G	F	A	T	Y	T	I	X	F	P	A	P	K	L	S	G	Q
Template Known Secondary structure									G	G	G	G	G	G	G													G	G	G														T	T	T	S	T	T											T	T												S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	E	H	S	V	Y	V	H	P	D	H	Q	G	K	G	L	G	R	K	L	L	S	R	L	I	D	E	A	R	D	C	G	K	H	V	M	V	A	G	I	E	S	Q	N	Q	A	S	L	H	L	H	Q	S	L	G	F	V	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	Y	X	K	D	L	F	V	S	S	S	A	R	G	K	G	I	G	L	Q	L	X	K	H	L	A	T	I	A	I	T	H	N	C	Q	R	L	D	W	T	A	E	S	T	N	P	T	A	G	K	F	Y	K	S	I	G	A	S	L	I
Template Known Secondary structure											G	G	G	T	T	S																	T	T										T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions