Job Description P76112 Confidence 99.62% Date Thu Jan 5 12:19:04 GMT 2012 Rank 97 Aligned Residues 128 % Identity 17% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.																			.
Query SS confidence																																																.	.																			.
Query Sequence		M	S	I	R	F	A	R	K	A	D	C	A	A	I	A	E	I	Y	N	H	A	V	L	Y	T	A	A	I	W	N	D	Q	T	V	D	A	D	N	R	I	A	W	F	E	A	R	.	.	T	L	A	G	Y	P	V	L	V	S	E	E	N	G	V	V	T	G	.	Y	A	S	F	G	D	W	R	S	F	D	G	F
Query Conservation																																																.	.																			.
Alig confidence																												.	.	.	.	.																.	.																			.
Template Conservation																												.	.	.	.	.
Template Sequence		P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	.	.	.	.	.	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G
Template Known Secondary structure		G	G						G	G	G															T	T	.	.	.	.	.																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	T	V	E	H	S	V	Y	V	H	P	D	H	Q	G	K	G	L	G	R	K	L	L	S	R	L	I	D	E	A	R	D	C	G	K	H	V	M	V	A	G	I	E	S	Q	N	Q	A	S	L	H	L	H	Q	S	L	G	F	V	V	T	A	Q
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		L	R	G	F	V	D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R
Template Known Secondary structure													G	G	G	T	T	S	S																T	T									.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions