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Job DescriptionP76112
Confidence99.75%DateThu Jan 5 12:19:04 GMT 2012
Rank72Aligned Residues150
% Identity18%Templatec2reeB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70
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Query Sequence  SIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTLAGYPVLVSEENGVVTGYASFGD. . . . . . . . . . .
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Template Sequence  NLRHPKIEDLRDLIALETLC. . . . . . WSENLQVDNEEIYRRIFKIPQ. . . GQFILELEDKIVGAIYSQRIDNPQLLDNKT
Template Known Secondary structure 


GGG......S
TTT



GG...G
TTS
GGGGTT

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   229230.........240........ .250.........260......... 270.........280.........290.........
 
   71........80.........90.........100.........110. ........120....
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Query Sequence  . . . . . WRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDC. GKHVMVAGIESQN. . . . . . . . . . . . . . . . . . . .
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Template Sequence  CTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESG
Template Known Secondary structure  TTTGGGG

TT
S
TTSTTSSTTSTT



SSGGGGTTS
TT
B
TTS
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   300.........310.........320.........330.........340.........350.........360.........370.........
 
   125....130.........140...... ...150.........160
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Query Sequence  . . . QASLHLHQSLGFVVTAQMPQVG. . . TKFGRWLDLTFMQL
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Template Sequence  LLVDPLLRFHQIHGAKIEKLLPGYRPKDWENQTCGVLVSYDI
Template Known Secondary structure 
BSSTT
TTS
TT
GGGTT


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   380.........390.........400.........410.........420.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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