Job Description P76112 Confidence 78.80% Date Thu Jan 5 12:19:04 GMT 2012 Rank 165 Aligned Residues 130 % Identity 9% Template c1lrzA_ PDB info PDB header:antibiotic inhibitor Chain: A: PDB Molecule:factor essential for expression of methicillin PDBTitle: x-ray crystal structure of staphylococcus aureus fema Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	I	R	F	A	R	K	A	D	C	A	A	I	A	E	I	Y	N	H	A	V	L	Y	T	A	A	I	W	N	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	V	R	F	L	S	E	E	E	L	P	I	F	R	S	F	M	D	D	K	F	Y	Y	N	R	L	K	Y	Y	K	D	R	V	L	V	P	L	A	Y	I	N	F	D	E	Y	I	K	E	L	N	E	E	R	D	I	L	N	K	D	L	N	K	A	L	K	D	I	E	K	R	P	E	N	K	K	A	H	N	K
Template Known Secondary structure									G	G	G																					G	G	G																																							T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	D	A	D	N	R	I	A	W	F	E	A	R	T	L	A	G	Y	P	V	L	V	S	E	E	N	G	V	V	T	G	Y	A	S	F	G	D	W	R	S	F	D	G	F	R	H	T	V	E	H	S	V	Y	V	H	P	D	H	Q	G	K	G	L	G	R	K	L	L	S	R	L	I	D	E	A	R	D	C	G
Query Conservation
Alig confidence																																																			.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		R	D	N	L	Q	Q	Q	L	D	A	N	E	Q	K	I	E	E	G	K	R	L	Q	E	E	H	G	N	E	L	P	I	S	A	G	F	F	F	I	N	P	F	E	V	V	Y	Y	A	G	G	.	.	.	.	.	T	S	N	A	F	R	H	F	A	G	S	Y	A	V	Q	W	E	M	I	N	Y	A	L	N	H	G
Template Known Secondary structure																												S													S	S									.	.	.	.	.			G	G	G	G	G	G																	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.						.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		113	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		K	H	V	M	V	A	G	.	.	.	.	.	.	.	I	E	S	Q	N	Q	A	S	L	H	L	H	Q	S	L	G
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	R	Y	N	F	Y	G	V	S	G	K	F	T	E	D	A	E	D	A	G	V	V	K	F	K	K	G	Y	N
Template Known Secondary structure												S			S	T	T		T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions