|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
|
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
L | K | L | T | D | I | T | W | L | Y | H | H | . |
. |
. |
. |
L | P | M | R | F | S | L | T | V | E | R | G | E | Q | V | A | I | L | G | P | S | G | A | G | K | S | T | L | L | N | L | I | A | G | F | L | T | P | A | S | G | S | L | T | I | D | G | V | D | H | T | T | M | P | P | S | . |
. |
R | R | P | V | S | M |
Query Conservation |   |
|   |   |   |
|
|   |   |   |
|   |   | . | . | . | . |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
L | E | F | R | N | V | T | F | T | Y | P | G | R | E | V | P | A | L | R | N | I | N | L | K | I | P | A | G | K | T | V | A | L | V | G | R | S | G | S | G | K | S | T | I | A | S | L | I | T | R | F | Y | D | I | D | E | G | H | I | L | M | D | G | H | D | L | R | E | Y | T | L | A | S | L | R | N | Q | V | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| S | S | S | S | S |
|
| S |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  | T | T | T | T |
|
| S |  |  |  |  |  |  | T | T |  |  | T | T | T | B |
|  |  |  |  |  |  | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
342 | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
. | . | . | . | . | . | |
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | Q | E | N | N | L | F | S | H | L | T | V | A | Q | N | I | G | L | G | L | N | P | G | L | K | L | N | A | V | Q | Q | G | K | M | H | . |
. |
. |
. |
A | I | A | R | Q | M | . |
. |
G | I | D | N | L | M | A | R | L | P | G | E | L | S | G | G | Q | R | Q | R | V | A | L | A | R | C | L | V | R | E | Q | P |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
|   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|   |   |   | . |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |
|
|
|
|
|   |   |   |
|   |
Template Sequence |   |
V | S | Q | N | V | H | L | F | N | D | . |
T | V | A | N | N | I | A | Y | A | R | T | E | E | Y | S | R | E | Q | I | E | E | A | A | R | M | A | Y | A | M | D | F | I | N | K | M | D | N | G | L | D | T | I | I | G | E | N | G | V | L | L | S | G | G | Q | R | Q | R | I | A | I | A | R | A | L | L | R | D | S | P |
Template Known Secondary structure |   |
 |
| S | S |
|
|
|
| S | S | . | B |  |  |  |  |  |  | T | T | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | S | T | T | G | G | G | S | B |
|
| T | T | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
422 | . | . | . | . | . | . | . | 430 | . | |
. | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 |
  |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | L | L | D | E | P | F | S | A | L | D | P | A | L | R | Q | E | M | L | T | L | V | S | T | S | C | Q | Q | Q | K | M | T | L | L | M | V | S | H | S | V | E | D | A | A | R | I | A | T | R | S | V | V | V | A | D | G | R | I | A | W | Q | G | M | T | N | E | L | L | S | G | K | A | S | A | S | A | L | L |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . |   |   |
|
|
|   |   |
|
|   |   |   |   |   | . |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
I | L | I | L | D | E | A | T | S | A | L | D | T | E | S | E | R | A | I | Q | A | A | L | D | E | L | Q | K | . |
. |
N | R | T | S | L | V | I | A | H | R | L | S | T | I | . |
E | Q | A | D | E | I | V | V | V | E | D | G | I | I | V | E | R | G | T | H | S | E | L | L | A | Q | H | G | V | Y | A | Q | L | H |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T | S |  |  |  |  |  |
| S |
| G | G | G | T | . | T | T |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  |  | T | S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
501 | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | |
|
. | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | |
. | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . |
  |