|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
Query Sequence |   |
M | L | K | L | T | D | I | T | W | L | Y | H | H | . |
. |
L | P | M | R | F | S | L | T | V | E | R | G | E | Q | V | A | I | L | G | P | S | G | A | G | K | S | T | L | L | N | L | I | A | G | F | L | T | P | A | S | G | S | L | T | I | D | G | V | D | H | T | T | M | P | P | S | R | . |
. |
. |
R | P | V | S | M |
Query Conservation |   |
|
|   |   |   |
|
|   |   |   |
|   |   | . | . |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
I | L | R | T | E | N | I | V | K | Y | F | G | E | F | K | A | L | D | G | V | S | I | S | V | N | K | G | D | V | T | L | I | I | G | P | N | G | S | G | K | S | T | L | I | N | V | I | T | G | F | L | K | A | D | E | G | R | V | Y | F | E | N | K | D | I | T | N | K | E | P | A | E | L | Y | H | Y | G | I | V | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
|  |  |  | T | T |
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  | T | T | S | S |
|
| S |  |  |  |  |  |  | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |  | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | Q | E | N | N | L | F | S | H | L | T | V | A | Q | N | I | G | L | G | L | N | P | G | L | K | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | A | V | Q | Q | G | K | M | H | A | I | A | R | Q | M | G | I | D | N | L | M | A | R | L | P | G | E | L | S | G | G | Q | R | Q | R | V | A | L | A | R |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|
Template Sequence |   |
T | F | Q | T | P | Q | P | L | K | E | M | T | V | L | E | N | L | L | I | G | E | I | C | P | G | E | S | P | L | N | S | L | F | Y | K | K | W | I | P | K | E | E | E | M | V | E | K | A | F | K | I | L | E | F | L | K | L | S | H | L | Y | D | R | K | A | G | E | L | S | G | G | Q | M | K | L | V | E | I | G | R |
Template Known Secondary structure |   |
|
|
|
|
| G | G | G | G | G | S | B |  |  |  |  |  |  | G | G | G | T | S | T | T | S |
|  |  |  |  |  |  |  |
| S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | T | T | S | B | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
C | L | V | R | E | Q | P | I | L | L | L | D | E | P | F | S | A | L | D | P | A | L | R | Q | E | M | L | T | L | V | S | T | S | C | Q | Q | Q | K | M | T | L | L | M | V | S | H | S | V | E | D | A | A | R | I | A | T | R | S | V | V | V | A | D | G | R | I | A | W | Q | G | M | T | N | E | L | L | . |
. |
. |
. |
Query Conservation |   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   | . |
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
A | L | M | T | N | P | K | M | I | V | M | D | E | P | I | A | G | V | A | P | G | L | A | H | D | I | F | N | H | V | L | E | L | K | A | K | . |
G | I | T | F | L | I | I | E | H | R | L | D | I | V | L | N | Y | I | D | H | L | Y | V | M | F | N | G | Q | I | I | A | E | G | R | G | E | E | E | I | K | N | V | L |
Template Known Secondary structure |   |
 |  |  | T |
|
| S |  |  |  |  |  | S | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  |  |
| S |
|
| S | T | T | G | G | G |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
  |
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | K | A | S | A | S | A | L | L | G | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
S | D | P | K | V | V | E | I | Y | I | G | E |
Template Known Secondary structure |   |
 |
|  |  |  |  |  | T | T | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
246 | . | . | . | 250 | . | . | . | . | . | . | . |
  |