Job Description P31548 Confidence 100.00% Date Thu Jan 5 11:48:08 GMT 2012 Rank 12 Aligned Residues 228 % Identity 28% Template c3gfoA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq. Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure															.	.	.																																																			.	.	.	.
Query SS confidence															.	.	.																																																			.	.	.	.
Query Sequence		M	L	K	L	T	D	I	T	W	L	Y	H	H	.	.	.	L	P	M	R	F	S	L	T	V	E	R	G	E	Q	V	A	I	L	G	P	S	G	A	G	K	S	T	L	L	N	L	I	A	G	F	L	T	P	A	S	G	S	L	T	I	D	G	V	D	H	.	.	.	.	T	T	M	P	P	S	R	R	P	V
Query Conservation															.	.	.																																																			.	.	.	.
Alig confidence															.	.	.																																																			.	.	.	.
Template Conservation
Template Sequence		I	L	K	V	E	E	L	N	Y	N	Y	S	D	G	T	H	A	L	K	G	I	N	M	N	I	K	R	G	E	V	T	A	I	L	G	G	N	G	V	G	K	S	T	L	F	Q	N	F	N	G	I	L	K	P	S	S	G	R	I	L	F	D	N	K	P	I	D	Y	S	R	K	G	I	M	K	L	R	E	S	I
Template Known Secondary structure													T	T	S													T	T	S								T	T	S	S									T	T	S	S			S							T	T						S										S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		74	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	M	L	F	Q	E	N	.	N	L	F	S	H	L	T	V	A	Q	N	I	G	L	G	L	N	P	G	L	K	L	N	A	V	Q	Q	G	K	M	H	A	I	A	R	Q	M	G	I	D	N	L	M	A	R	L	P	G	E	L	S	G	G	Q	R	Q	R	V	A	L	A	R	C	L	V	R	E	Q	P	I	L	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		G	I	V	F	Q	D	P	D	N	Q	L	F	S	A	S	V	Y	Q	D	V	S	F	G	A	V	N	M	K	L	P	E	D	E	I	R	K	R	V	D	N	A	L	K	R	T	G	I	E	H	L	K	D	K	P	T	H	C	L	S	F	G	Q	K	K	R	V	A	I	A	G	V	L	V	M	E	P	K	V	L	I
Template Known Secondary structure						S	S	G	G	G	T			S	S	B											T	S																		T	T		G	G	G	T	T	S	B	G	G	G	S															T	T			S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	P	F	S	A	L	D	P	A	L	R	Q	E	M	L	T	L	V	S	T	S	C	Q	Q	Q	K	M	T	L	L	M	V	S	H	S	V	E	D	A	A	R	I	A	T	R	S	V	V	V	A	D	G	R	I	A	W	Q	G	M	T	N	E	L	L	S	G	K	A	S	A	S	A	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	P	T	A	G	L	D	P	M	G	V	S	E	I	M	K	L	L	V	E	M	Q	K	E	L	G	I	T	I	I	I	A	T	H	D	I	D	I	V	P	L	Y	C	D	N	V	F	V	M	K	E	G	R	V	I	L	Q	G	N	P	K	E	V	F	A	E	K	E	V	I	R	K	V	N
Template Known Secondary structure					T	T	T	T																													S			S	S	G	G	G	G		S							T	T												T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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