Job Description P31548 Confidence 97.87% Date Thu Jan 5 11:48:08 GMT 2012 Rank 116 Aligned Residues 156 % Identity 10% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	G	E	Q	V	A	I	L	G	P	S	G	A	G	K	S	T	L	L	N	L	I	A	G	F	L	T	P	A	S	G	S	L	T	I	D	G	V	D	H	T	T	M	P	P	S	R	R	P	V	S	M	L	F	Q	E	N	N	L	F	S	H	L	T	V	A	Q	N	I	G	L	G	L	N	P	G	L	K
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.										.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.										.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	.	.	.	.	.	.	.	A	G	S	I	N	A	Q	K	I	.	.	.	.	K	A	A	R	R	D
Template Known Secondary structure		B		S	S									S	S	S	S															T	T								S	S	S													.	.	.	.	.	.	.		S								.	.	.	.		T	T	G	G	G
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.					.	.	.	.	.	260
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																															.	.										.	.	.	.	.	.	.
Query SS confidence																																															.	.										.	.	.	.	.	.	.
Query Sequence		L	N	A	V	Q	Q	G	K	M	H	A	I	A	R	Q	M	G	I	D	N	L	M	A	R	L	P	G	E	L	S	G	G	Q	R	Q	R	V	A	L	A	R	C	L	V	R	.	.	E	Q	P	I	L	L	L	D	E	.	.	.	.	.	.	.	P	F	S	A	L	D	P	A	L	R	Q	E	M	L	T	L	V
Query Conservation																																															.	.										.	.	.	.	.	.	.
Alig confidence																																															.	.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L
Template Known Secondary structure		T			S														T	S								S	S		B															S		S	S									S	S	S	S	B		S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	C	Q	Q	Q	K	M	T	L	L	M	V	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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