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Job DescriptionP31548
Confidence97.95%DateThu Jan 5 11:48:08 GMT 2012
Rank112Aligned Residues151
% Identity13%Templatec2zjbB_
PDB info PDB header:recombinationChain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.... .....90.
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Query Sequence  VERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTMPPSRRPVSMLFQENNLFS. . . . . . . . . . HLTVAQN
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Template Sequence  IESMAITEAFGEFRTGKTQLSHTLC. . . . . . . . . . . VTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAV
Template Known Secondary structure  SSS

SS
T...........TTS
BTTTB


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GGGGT

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   116...120.........130.........140 .........150.........160.........170.........180....
 
   92.......100.........110.........120.........130.........140.........150.........160...
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Query Sequence  IGLGLNPGLKLNAVQQGKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPA. . . . . . . .
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Template Sequence  LDNVLYARAYTSEHQVELLDYVAAKF. . . . . . . . . . . . . . . . . . . . . . . . HEEAGIFKLLIIDSIMALFRVDFSGRGELA
Template Known Secondary structure  TTS


STT........................S
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GGG
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   185....190.........200.........210 .........220.........230.........240
 
   164.....170.........180.........190.........200.......
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Query Sequence  . . . . LRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGR
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Template Sequence  ERQQKLAQMLSRLQKISEEYNVAVFVTNQMGHILAHASTTRISLRKGR
Template Known Secondary structure  TT





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   241........250.........260.........270.........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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