Job Description P31548 Confidence 100.00% Date Thu Jan 5 11:48:08 GMT 2012 Rank 33 Aligned Residues 208 % Identity 34% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																																									.	.
Query SS confidence														.	.	.	.	.																																																									.	.
Query Sequence		L	K	L	T	D	I	T	W	L	Y	H	H	.	.	.	.	.	L	P	M	R	F	S	L	T	V	E	R	G	E	Q	V	A	I	L	G	P	S	G	A	G	K	S	T	L	L	N	L	I	A	G	F	L	T	P	A	S	G	S	L	T	I	D	G	V	D	H	T	T	M	P	P	S	.	.	R	R	P	V	S
Query Conservation														.	.	.	.	.																																																									.	.
Alig confidence														.	.	.	.	.																																																									.	.
Template Conservation
Template Sequence		L	E	F	K	N	V	H	F	A	Y	P	A	R	P	E	V	P	I	F	Q	D	F	S	L	S	I	P	S	G	S	V	T	A	L	V	G	P	S	G	S	G	K	S	T	V	L	S	L	L	L	R	L	Y	D	P	A	S	G	T	I	S	L	D	G	H	D	I	R	Q	L	N	P	V	W	L	R	S	K	I	G
Template Known Secondary structure												S	S		T	T	S												T	T									T	T	S	S	S	T							T	T	S	S			S							T	T			T	T	T	B								S
Template Predicted Secondary structure
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.												.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	F	Q	E	N	N	L	F	S	H	L	T	V	A	Q	N	I	G	L	G	L	N	P	G	L	K	L	N	A	V	Q	Q	G	K	M	H	A	I	A	R	Q	M	G	I	D	N	L	M	A	R	L	P	G	.	.	.	.	.	.	.	.	.	.	.	E	L	S	G	G	Q	R	Q	R	V	A	L	A	R	C
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																			.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																			.	.	.
Template Sequence		T	V	S	Q	E	P	I	L	F	S	C	.	S	I	A	E	N	I	A	Y	G	A	D	D	P	S	S	V	T	A	.	.	.	E	E	I	Q	R	V	A	E	V	A	N	A	V	A	F	I	R	N	F	P	Q	G	F	N	T	V	V	G	E	K	G	V	L	L	S	G	G	Q	K	Q	R	I	A	I	A	R	A
Template Known Secondary structure					S	S					S	S	.	B							T	T	S	S	S	T	T	T	S			.	.	.										T	T							T	S	S	S	G	G	G		B		S	S	S	S
Template Predicted Secondary structure													.																			.	.	.
Template SS confidence
		572	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600				.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	E	Q	P	I	L	L	L	D	E	P	F	S	A	L	D	P	A	L	R	Q	E	M	L	T	L	V	S	T	S	C	Q	Q	Q	K	M	T	L	L	M	V	S	H	S	V	E	D	A	A	R	I	A	T	R	S	V	V	V	A	D	G	R	I	A	W	Q	G	M	T	N	E
Query Conservation
Alig confidence																																					.	.																.
Template Conservation																																					.	.																.
Template Sequence		L	L	K	N	P	K	I	L	L	L	D	E	A	T	S	A	L	D	A	E	N	E	Y	L	V	Q	E	A	L	D	R	L	M	D	G	.	.	R	T	V	L	V	I	A	H	R	L	S	T	I	K	N	.	A	N	M	V	A	V	L	D	Q	G	K	I	T	E	Y	G	K	H	E	E
Template Known Secondary structure							S									S	S																		T	T	.	.	S															.	S	S							T	T								S
Template Predicted Secondary structure																																					.	.																.
Template SS confidence
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.			.	.	.	.	.	.	.	690	.	.	.	.	.	.	.		.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions