Job Description P31548 Confidence 98.70% Date Thu Jan 5 11:48:08 GMT 2012 Rank 88 Aligned Residues 156 % Identity 13% Template c1wxqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 Resolution 2.60 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	I	L	G	P	S	G	A	G	K	S	T	L	L	N	L	I	A	G	F	.	.	.	.	.	.	.	.	.	L	T	P	A	S	G	S	L	T	I	D	G	V	D	H	T	T	M	P	P	S	R	R	P	V	S	M	L	F	Q	E	N	N	L	F	S	H	L	T	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	V	V	G	K	P	N	V	G	K	S	T	F	F	S	A	A	T	L	A	N	V	G	V	T	Y	A	I	T	D	H	P	C	K	E	L	G	C	S	P	N	P	Q	N	Y	E	Y	R	N	G	L	A	L	I	P	V	K	X	V	D	V	A	F	L	D	D	L	R	X	A	S	A	L	I	H	V	V	D	A
Template Known Secondary structure								T	T	S	S																							S		S	S	S			S				S	S	S				T	T																S	S	T	T		S								T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Q	N	I	G	L	G	L	N	P	G	L	K	L	N	A	V	Q	Q	G	K	M	H	A	I	A	R	Q	M	G	I	D	.	N	L	M	A	R	L	P	G	E	L	S	G	G	Q	R	Q	R	V	A	L	A	R	C	L	V	R	E	Q	P	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		T	G	K	T	D	P	E	G	Q	P	T	D	Y	H	D	P	V	E	D	I	E	F	L	E	R	E	I	D	Y	W	I	Y	G	I	L	S	K	G	W	D	K	F	A	K	R	I	K	L	Q	K	I	K	L	E	S	A	I	A	E	H	L	S	G	I	G	V	N	E	N	D	V	W	E	A	X	H	K	L	N	L
Template Known Secondary structure		T			B		T	T	S		B		S																									T	T	T					S	T	T	T	S	S												T	G	G	G	T													T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	D	E	P	F	S	A	L	D	P	A	L	R	Q	E	M	L	T	L	V	S	T	S	C	Q	Q	Q	K	M	T	L	L	M	V	S	H	S
Query Conservation
Alig confidence														.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.
Template Sequence		P	E	D	P	T	K	W	S	Q	D	D	L	.	.	.	.	.	.	L	A	F	A	S	E	I	R	R	V	N	K	P	X	V	I	A	A	N	K	A
Template Known Secondary structure			S		G	G	G							.	.	.	.	.	.												S									G
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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