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Job DescriptionP0AEZ3
Confidence99.95%DateThu Jan 5 11:24:41 GMT 2012
Rank21Aligned Residues223
% Identity22%Templatec3zq6D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative arsenical pump-driving atpase; PDBTitle: adp-alf4 complex of m. therm. trc40
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50... ......60.........70.........80.
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Query Sequence  RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCE. RRVVYDFVNVIQGDATLNQALIKDKRTE
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Template Sequence  TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP. AHSLSDSLEREIGHTPTKITENLYAVEIDPEVAMEEYQAK
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   14.....20.........30.........40.........50.. .......60.........70.........80.........90..
 
   82.......90.........100.........110 .........120.........130...
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Query Sequence  NLYILPASQTRDKDALTREGVAKVLDDLK. AMDFEFIVCDSPAGIETGALMAL. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LMLQDQMDMASMSPGIDEAAAFDQFLRYMTTDEYDIVIFDTAPTGHTLRLLSFPEIMDSWVGKMIKIRRQIGSMAKAFKN
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   134.....140.........150.........160.........170.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLL
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Template Sequence  ILPFMGDEEEEDRALQDMEATKKQINAAREVMSDPERTSFKMVVIPEEMSIYESERAMKALEKYSIH. . . . . . . . ADGVI
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   186...190.........200.........210.........220.........230.........240.........250.. .....
 
   180.........190. ........200.........210.........220.........230.........240.........
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Query Sequence  LTRYNPGRVSRG. . . . . . . . DMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGE
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Template Sequence  VNQVLPEESDCEFCNARRKLQQERLKQIREKFSDKVVAEVPL. . . . . . . . . . . . . . . LKKEAKGIETLEKIAEQLYGE
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   258.260.........270.........280.........290......... 300.........310.........320
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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