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Job DescriptionP0AEZ3
Confidence100.00%DateThu Jan 5 11:24:41 GMT 2012
Rank11Aligned Residues228
% Identity21%Templatec3kjgB_
PDB info PDB header:hydrolase, metal binding proteinChain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase complex, accessory PDBTitle: adp-bound state of cooc1
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........
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Query Sequence  IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKR. . . . .
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Template Sequence  LAV. AGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP. DSCLGQTLGLSIEEAYAITPLIEMKDEIREKTGDGGLLILNP
Template Known Secondary structure  .

TTS
TTTSS


T.TS
TT

TS

GGG
T
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SS
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   3.. ....10.........20.........30........ .40.........50.........60.........70.........80
 
   80.........90.........100. ........110.........120.........130.........140..
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Query Sequence  . . . . . . . . . . . . . TENLYILPASQTRDKDALTREG. . . . VAKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIIT
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Template Sequence  KVDGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFLGSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAV
Template Known Secondary structure 

GGGGGGSSSSSS





S
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T

S
TT
TT

TT
S
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   143......150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  TNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASN
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Template Sequence  IEPNLNSIKTGLNIEKLAGDLGIK. . . . . . . . KVRYVINKVRNIKEEK. . . . . . LIKKHLPEDKILGIIPYNELFIELSL
Template Known Secondary structure 
SSTTT

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   161........170.........180.... .....190.........200 .........210.........220......
 
   223......230.........240.........
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Query Sequence  QGEPVILDINADAGKAYADTVERLLGE
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Template Sequence  KGEEI. WQSTNPAFVNLHDIYQKLRLE
Template Known Secondary structure  TT

T.T
TTST
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   227..230. ........240.........250..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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