Job Description P0AEZ3 Confidence 100.00% Date Thu Jan 5 11:24:41 GMT 2012 Rank 12 Aligned Residues 247 % Identity 17% Template c3ez6B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:plasmid partition protein a; PDBTitle: structure of para-adp complex:tetragonal form Resolution 2.58 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.																																	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.																																	.	.	.	.	.	.
Query Sequence		A	R	I	I	V	V	T	S	G	K	G	G	V	G	K	T	T	S	S	A	A	I	A	T	G	L	A	.	.	.	.	.	.	Q	K	G	K	K	T	V	V	I	D	F	D	I	G	L	R	N	L	D	L	I	M	G	C	E	R	R	V	V	Y	D	F	.	.	.	.	.	.	V	N	V	I	Q	G	D	A	T
Query Conservation																													.	.	.	.	.	.																																	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.															.																		.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		A	Y	V	I	F	I	S	N	L	K	G	G	V	S	K	T	V	S	T	V	S	L	A	H	A	M	R	A	H	P	H	L	L	M	E	D	L	R	I	L	V	I	D	L	D	P	Q	.	S	S	A	T	M	F	L	S	H	K	H	S	I	G	I	V	N	A	T	S	A	Q	A	M	L	Q	N	V	S	R	E	E
Template Known Secondary structure										S	S	S	S	S	S																T	T	T	G	G	G											T	T	.								S		T	T	T	T		S		S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	Q	A	L	I	K	D	K	R	T	E	N	L	Y	I	L	P	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	R	D	K	D	A	L	T	R	E	G	V	A	K	V	L	D	D	L	K	A	M	D	F	E	F	I	V	C	D	S	P	A	G	I	E	T	G	A	L	M	A	L	Y	F
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	E	E	F	I	V	P	S	V	V	P	G	V	D	V	M	P	A	S	I	D	D	A	F	I	A	S	D	W	R	E	L	C	N	E	H	L	P	G	Q	N	I	H	A	V	L	K	E	N	V	I	D	K	L	K	S	D	Y	D	F	I	L	V	D	S	G	P	H	L	D	A	F	L	K	N	A	L	A	S
Template Known Secondary structure						T					S	S	T	T								T	T							T									S	T	T	S		T	T	S						T					T	T	T		S								S			S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		A	D	E	A	I	I	T	T	N	P	E	V	S	S	V	R	D	S	D	R	I	L	G	I	L	A	S	K	S	R	R	A	E	N	G	E	E	P	I	K	E	H	L	L	L	T	R	Y	N	P	G	R	V	S	R	G	D	M	L	S	M	E	D	V	L	E	I	L	R	I	K	L	V	.	G	V	I	P	E	D
Query Conservation																																																																											.
Alig confidence																																																																											.
Template Conservation
Template Sequence		A	N	I	L	F	T	P	L	P	P	A	T	V	D	F	H	S	S	L	K	Y	V	A	R	L	P	E	L	V	K	L	I	S	D	E	G	C	E	C	Q	L	A	T	N	I	G	F	M	S	K	L	S	N	K	A	D	H	K	Y	C	H	S	L	A	K	E	V	F	G	G	D	M	L	D	V	F	L	P	R	L
Template Known Secondary structure			S								S	S												T	T											T	S																	S																G	G	G	B		S	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.											.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	V	L	R	A	S	N	Q	G	E	P	V	I	L	D	I	N	A	D	.	.	.	.	.	.	.	.	.	.	A	G	K	A	Y	A	D	T	V	E	R	L	L	G	E
Query Conservation																						.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	F	E	R	C	G	E	S	F	D	T	V	I	S	A	N	P	A	T	Y	V	G	S	A	D	A	L	K	N	A	R	I	A	A	E	D	F	A	K	A	V	F	D	R
Template Known Secondary structure										T	T			T	T	T	S		T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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