Job Description P0AEZ3 Confidence 89.20% Date Thu Jan 5 11:24:41 GMT 2012 Rank 472 Aligned Residues 143 % Identity 12% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	V	T	S	G	K	G	G	V	G	K	T	T	S	S	A	A	I	A	T	G	L	A	Q	K	G	K	K	T	V	V	I	D	F	D	I	G	L	R	N	L	D	L	I	M	G	C	E	R	R	V	V	Y	D	F	V	N	V	I	Q	G	D	A	T	L	N	Q	A	L	I	K	D	K	R	T	E	N	L	Y
Query Conservation
Alig confidence								.																	.	.	.								.	.	.	.	.	.
Template Conservation								.																	.	.	.								.	.	.	.	.	.
Template Sequence		V	L	F	Y	G	P	.	P	G	C	G	K	T	L	L	A	K	A	I	A	N	E	C	.	.	.	Q	A	N	F	I	S	I	.	.	.	.	.	.	K	G	P	E	L	L	T	M	W	F	G	E	S	E	A	N	V	R	E	I	F	D	K	A	R	Q	A	A	P	C	V	L	F	F	D	E	L	D	S	I	A
Template Known Secondary structure								.	T	T	S													T	.	.	.	T							.	.	.	.	.	.										T	T	T		T							T	T	T	T	T	T	T		S						S	S	G	G	G	G
Template Predicted Secondary structure								.																	.	.	.								.	.	.	.	.	.
Template SS confidence
		514	.	.	.	.	.		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.				.	.	.	.	540	.	.							.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																									.	.
Query SS confidence																												.	.																									.	.
Query Sequence		I	L	P	A	S	Q	T	R	D	K	D	A	L	T	R	E	G	V	A	K	V	L	D	D	L	K	.	.	A	M	D	F	E	F	I	V	C	D	S	P	A	G	I	E	T	G	A	L	M	A	L	Y	.	.	F	A	D	E	A	I	I	T	T	N	P	E	V	S	S	V	R	D	S	D	R	I	L
Query Conservation																												.	.																									.	.
Alig confidence																												.	.																									.	.
Template Conservation
Template Sequence		K	A	R	G	G	N	I	G	D	G	G	G	A	A	D	R	V	I	N	Q	I	L	T	E	M	D	G	M	S	T	K	K	N	V	F	I	I	G	A	T	N	R	P	D	I	I	D	P	A	I	L	R	P	G	R	L	D	Q	L	I	Y	I	P	L	P	D	E	K	S	R	V	A	I	L	K	A	N
Template Known Secondary structure					T	T	T	T		S	S			S														S	S		T	T	S	S								S		G	G	G			G	G	G	T	S	T	T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions