Job Description P0AEZ3 Confidence 99.20% Date Thu Jan 5 11:24:41 GMT 2012 Rank 45 Aligned Residues 164 % Identity 20% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	I	V	V	T	S	G	K	G	G	V	G	K	T	T	S	S	A	A	I	A	T	G	L	A	Q	K	G	K	K	T	V	V	I	D	F	D	I	G	L	R	N	L	D	L	I	M	G	C	E	R	R	V	V	Y	D	F	V	N	V	I	Q	G	D	A	T	L	N	Q	A	L	I	K	D	K	R	T	E
Query Conservation
Alig confidence												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	V	I	M	I	V	G	V	N	.	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	S	D	Q	L	E	I	W	A	E	R	T
Template Known Secondary structure											T	.	T	S																T	T											S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																									.	.	.	.	210	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.													.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	Y	I	L	P	A	S	Q	T	R	D	K	D	A	L	T	R	E	G	V	A	K	V	L	D	D	L	K	A	M	D	F	E	F	I	V	C	D	S	P	A	.	.	G	I	E	T	G	A	L	M	A	L	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	A	D	E	A	I	I	T	T	N	P	E	V
Query Conservation																																												.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																								.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		G	C	E	I	V	V	A	E	K	A	K	A	A	T	.	.	.	.	.	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T
Template Known Secondary structure		T														.	.	.	.	.												T	T		S										S	S																		T	T	S	T	T			S								G	G	G
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	V	R	D	S	D	R	I	L	G	I	L	A	S	K	S	R	R	A	E	N	G	E	E	P	I	K	E	H	L	L	L	T	R	Y	N	P	G	R	V	S	R	G	D	M	L	S	M	E	D	V	L	E	I	L	R	I	K	L	V	G	V
Query Conservation
Alig confidence				.															.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation				.															.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		G	L	.	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	.	.	.	.	.	.	.	.	.	.	I	T	G	L	I	L	T	K	L	D	G	S	A	R	.	.	.	.	G	G	C	V	V	S	V	V	E	E	L	G	I	P	V	K	F	I
Template Known Secondary structure		G	G	.	G	G											T		.	.	.	.	.	.	.	.	.	.										S	S		S		.	.	.	.	T
Template Predicted Secondary structure				.															.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		296	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.											.	.	.	.	.	.	.	.	320	.	.	.	.	.					.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions