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Job DescriptionP0AEZ3
Confidence99.94%DateThu Jan 5 11:24:41 GMT 2012
Rank26Aligned Residues237
% Identity19%Templatec2wojD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:atpase get3; PDBTitle: adp-alf4 complex of s. cerevisiae get3
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MARIIVVTSGKGGVGKTTSSAAIATGLA. . QKGKKTVVIDFDIGLRNLDLIMGCERRVV. . . . . . . YDFVNVIQGDATLN
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Template Sequence  TTHKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA. HNLSDAFGEKFGKDARKVTGMNNLSCMEIDPSAAL
Template Known Secondary structure  SS


STTSS
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Query Sequence  QALIKDKRTENLYILPASQTRDKDALTREGVAKVL. . DDLKAMDFEFIVCDSPAGIETGALMAL. . . . . . . . . . . . . . . .
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Template Sequence  KDMNDMAVSRGSLLQGGALADLTGSIPGIDEALSFMEVMKHIKRFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGISGK
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   134.....140.........150.........160.........170.........180.........190..
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Query Sequence  . . . . . . . . . . . . . . . . . YFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGD. . . .
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Template Sequence  LNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYDMD. . . . . . . . VNSIIVNQLLFAENDQCKRCQA
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   216...220.........230.........240.........250.........260..... ....270.........280.......
 
   193......200.........210.........220.........230.........240.........250.........260.
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Query Sequence  . . . . . MLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKK
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Template Sequence  RWKMQKKYLDQIDELYEDFHVVKMPL. . . . . . . . . . . . . . . CAGEIRGLNNLTKFSQFLNKEYNPITDGKVIYE
Template Known Secondary structure  TTTS
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GGGGG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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