Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEZ3
Confidence92.95%DateThu Jan 5 11:24:41 GMT 2012
Rank271Aligned Residues33
% Identity36%Templatec2wjyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.. .....
Predicted Secondary structure 









.
Query SS confidence 



























.




Query Sequence  IVVTSGKGGVGKTTSSAAIATGLAQKGK. KTVVI
Query Conservation 
 
 
 







 
  

  

  
 . 



Alig confidence 



























.




Template Conservation 












 

  

  
      




Template Sequence  LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVC
Template Known Secondary structure 

TTS
TT
SS
Template Predicted Secondary structure 












Template SS confidence 

































   487..490.........500.........510.........520
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions