Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEZ3
Confidence99.13%DateThu Jan 5 11:24:41 GMT 2012
Rank48Aligned Residues146
% Identity17%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN
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Template Sequence  NLWFLV. GLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRP. . . . . . . . . . . . . . . . . . . . . . . . AAREQLRLLGEKVG
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   99100.... .....110.........120.........130......... 140.........150...
 
   83......90.........100.........110.........120..... ....130.........140.........150....
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Query Sequence  LYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGI. . . . . . . . ETGALMALYFADEAIITTNPEVSSVRDSD
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Template Sequence  VPVLEVMDGESPESI. . . . RRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQ. EALS
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   154.....160........ .170.........180.........190.........200.........210.........220.... ....
 
   155....160.........170.........180........
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Query Sequence  RILGILASKSRRAENGEEPIKEHLLLTRYNPGRV
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Template Sequence  VARAFDEKVG. . . . . . . . . . VTGLVLTKLDGDAR
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   229230........ .240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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