Job Description P0AFQ5 Confidence 10.62% Date Thu Jan 5 11:26:58 GMT 2012 Rank 39 Aligned Residues 34 % Identity 15% Template d1aisa1 SCOP info TBP-like TATA-box binding protein-like TATA-box binding protein (TBP), C-terminal domain Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Y	V	S	G	T	L	A	F	D	Q	H	N	N	V	L	F	A	D	D	P	K	A	Q	T	R	H	V	L	E	T	I	R	K	V	I	E	T	A	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		L	I	F	S	S	G	K	L	V	V	.	.	.	.	.	.	.	T	G	A	K	S	V	Q	D	I	E	R	A	V	A	K	L	A	Q	K	L	K	S	I	G
Template Known Secondary structure					T	T	S					.	.	.	.	.	.	.				S	S																		T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions