Job Description P0AFQ5 Confidence 99.97% Date Thu Jan 5 11:26:58 GMT 2012 Rank 28 Aligned Residues 106 % Identity 28% Template c3kjjL_ PDB info PDB header:unknown function Chain: L: PDB Molecule:nmb1025 protein; PDBTitle: crystal structure of nmb1025, a member of yjgf protein family, from2 neisseria meningitidis (hexagonal crystal form) Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	P	F	V	P	G	T	L	A	D	G	V	V	Y	V	S	G	T	L	A	F	D	Q	H	N	N	V	L	F	A	D	D	P	K	A	Q	T	R	H	V	L	E	T	I	R	K	V	I	E	T	A	G	G	T	M	A	D	V	T	F	N	S	I	F	I	T	D	W	K	N	Y	A	A	I	N	E	I	Y
Query Conservation
Alig confidence																										.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		T	T	P	R	Y	S	E	A	V	G	A	N	G	L	I	F	L	S	G	X	V	P	E	N	.	.	.	.	.	.	.	G	E	T	A	A	E	Q	T	A	D	V	L	A	Q	I	D	R	W	L	A	E	C	G	S	D	K	A	H	V	L	D	A	V	I	Y	L	R	D	X	G	D	Y	A	E	X	N	G	V	W
Template Known Secondary structure				S	S								T	T							B			S	S	.	.	.	.	.	.	.		S	S																		T	T	T			T	T	S									S		G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		94	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	E	F	F	P	G	.	D	K	P	A	R	F	C	I	Q	C	G	L	V	K	P	D	A	L	V	E	I	A	T	I	A	H	I
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		D	A	W	V	A	A	G	R	T	P	A	R	A	C	V	E	A	R	L	A	R	P	E	W	R	V	E	I	K	I	T	A	V	K
Template Known Secondary structure					S		T	T													S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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