Job Description P0AFQ5 Confidence 100.00% Date Thu Jan 5 11:26:58 GMT 2012 Rank 6 Aligned Residues 123 % Identity 32% Template c3k0tA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:endoribonuclease l-psp, putative; PDBTitle: crystal structure of pspto -psp protein in complex with d-beta-glucose2 from pseudomonas syringae pv. tomato str. dc3000 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	I	I	P	A	G	S	S	A	P	L	A	P	F	V	P	G	T	L	A	D	G	V	V	Y	V	S	G	T	L	A	F	D	Q	H	N	N	V	L	F	A	D	D	P	K	A	Q	T	R	H	V	L	E	T	I	R	K	V	I	E	T	A	G	G	T	M	A	D	V	T	F	N	S	I	F	I	T	D
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		K	T	V	I	T	S	D	K	A	P	A	A	I	G	P	Y	S	Q	A	I	K	A	G	N	T	V	Y	X	S	G	Q	I	P	L	D	P	S	T	X	E	L	.	V	E	G	I	E	A	Q	I	T	Q	V	F	E	N	L	K	S	V	A	Q	A	A	G	G	S	F	K	D	I	V	K	L	N	I	F	L	T	D
Template Known Secondary structure								T	T	S					S	S			S					T	T									S	B		T	T	T		S	B	.		S	S																			T	T			G	G	G									S
Template Predicted Secondary structure																																											.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	N	Y	A	A	I	N	E	I	Y	A	E	F	F	P	G	D	K	P	A	R	F	C	I	Q	C	G	L	V	K	P	D	A	L	V	E	I	A	T	I	A	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	H	F	A	K	V	N	E	I	X	G	S	Y	F	S	Q	P	Y	P	A	R	A	A	I	G	V	A	A	L	P	R	G	A	Q	V	E	X	D	A	I	L	V	I
Template Known Secondary structure		G	G	G									T	T	T			S	S										S			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions