Return to main results Retrieve Phyre Job Id

Job DescriptionP77627
Confidence6.77%DateThu Jan 5 12:31:18 GMT 2012
Rank12Aligned Residues34
% Identity18%Templated2oa4a1
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like SPO1678-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140..
Predicted Secondary structure 







Query SS confidence 


































Query Sequence  CCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLW
Query Conservation       

 


  
   
 
     



  

  
Alig confidence 



















.













Template Conservation 


   
 







 

 .

  



  

  
Template Sequence  DLPPANTRRWVASRKIAVVR. GVIYGLITLAEAKQ
Template Known Secondary structure  SS

S

S


.TT

Template Predicted Secondary structure 






.



Template SS confidence 


































   25....30.........40.... .....50........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions