Job Description P76630 Confidence 1.39% Date Thu Jan 5 12:25:06 GMT 2012 Rank 55 Aligned Residues 200 % Identity 14% Template c2jlnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter Resolution 2.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	P	T	P	Q	P	A	P	G	S	A	T	F	M	E	G	C	K	D	S	L	P	I	V	I	S	Y	I	P	V	A	F	A	F	G	L	N	A	T	R	L	G	F	S	P	L	E	S	V	F	F	S	C	I	I	Y	A	G	A	S	Q	F	V	I	T	A	M	L	A	A	G	S	S	L	W	I	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	K	V	D	P	N	A	S	R	E	G	Q	T	K	A	D	A	R	Y	A	T	A	Q	W	L	G	M	V	P	A	S	I	I	F	G	F	I	G	A	A	S	M	V	L	V	G	E	W	N	P	V	I	A	I	T	E	V	V	G	G	V	S	I	P	M	A	I	L	F	Q	V	F	V	L	L	A	T	W	S
Template Known Secondary structure		T	B				T	T																																								S		S											T																				T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	M	A	M	D	V	R	H	V	L	Y	G	P	S	L	R	S	R	I	I	Q	R	L	Q	K	S	K	T	A	L	W	A	F	G	L	T	D	E	V	F	A	A	A	T	A	K	L	V	R	N	N	R	R	W	S	E	N	W	M	I	G	I	A	F	S	S	W	S	S	W	V	F	G	T	V	I	G	A	F
Query Conservation
Alig confidence									.	.								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	P	A	A	N	L	.	.	L	S	P	A	Y	T	L	.	C	S	T	F	P	R	V	F	T	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	V	I	V	S	A	V	V	G	L	L	M
Template Known Secondary structure		T						T	.	.								.				S	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure									.	.								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.			320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.																																								.	.	340	.	.	.	.	.	.	.	.	.	350
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	S	G	L	L	Q	G	Y	P	A	V	E	A	A	L	G	F	M	L	P	A	L	F	M	S	F	L	L	A	S	F	Q	R	K	Q	S	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	A	A	L	V	G	A	L	A	G	V	T	L	F	S	I	P	V	A	I
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	P	W	Q	F	A	G	V	L	N	T	F	L	N	L	L	A	S	A	L	G	P	L	A	G	I	M	I	S	D	Y	F	L	V	R	R	R	R	I	S	L	H	D	L	Y	R	T	K	G	I	Y	T	Y	W	R	G	V	N	W	V	A	L	A	V	Y	A	V	A	L	A	V	S	F	L	T	P	D	L	M	F
Template Known Secondary structure			G	G	G	T														T	T													T	T	S	T	T								T	B	S	S	S	T	T		T	B	T	T	B																	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	I	V	C	G	C	L	T	A	L	I	Q	A	F	W	Q	G	A	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	L	I	A	A	L	L	L	H	I	P	A	M	R	W	V	A	K	T	F
Template Known Secondary structure																				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions