Job Description P77622 Confidence 100.00% Date Thu Jan 5 12:31:12 GMT 2012 Rank 21 Aligned Residues 222 % Identity 32% Template d2pmka1 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		L	T	L	R	D	V	H	I	N	F	P	A	R	K	N	W	L	G	K	T	T	E	H	V	H	A	I	N	G	I	D	L	Q	I	R	R	G	E	T	L	G	I	V	G	E	S	G	C	G	K	S	T	L	A	Q	L	L	M	G	M	L	Q	P	S	H	G	Q	Y	I	R	S	G	S	Q	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	F	R	N	I	R	F	R	Y	K	P	D	S	P	.	.	.	.	.	.	.	.	.	V	I	L	D	N	I	N	L	S	I	K	Q	G	E	V	I	G	I	V	G	R	S	G	S	G	K	S	T	L	T	K	L	I	Q	R	F	Y	I	P	E	N	G	Q	V	L	I	D	G	H	D	L	A	L	A	D	P
Template Known Secondary structure											S	S	T	T	S		.	.	.	.	.	.	.	.	.												T	T								S	T	T	S	S									T	T	S	S			S							T	T			T	T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.										.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.																												.	.	.
Query SS confidence		.	.	.	.																												.	.	.
Query Sequence		.	.	.	.	R	I	M	Q	M	V	F	Q	D	P	L	S	S	L	N	P	R	L	P	V	W	R	I	I	T	E	P	.	.	.	L	W	I	A	K	R	S	S	E	Q	Q	R	R	A	L	A	E	E	L	A	V	Q	V	G	I	R	P	E	Y	L	D	R	L	P	H	A	F	S	G	G	Q	R	Q	R	I	A
Query Conservation		.	.	.	.																												.	.	.
Alig confidence		.	.	.	.											.	.	.															.	.	.
Template Conservation																.	.	.
Template Sequence		N	W	L	R	R	Q	V	G	V	V	L	Q	D	N	.	.	.	V	L	L	N	R	S	I	I	D	N	I	S	L	A	N	P	G	M	S	V	E	K	V	I	Y	A	A	K	L	A	G	A	H	D	F	I	S	E	L	R	E	G	Y	N	T	I	V	G	E	Q	G	A	G	L	S	G	G	Q	R	Q	R	I	A
Template Known Secondary structure													S	S		.	.	.			T	T	S	B							T	T	S	T	T														T						T	T	S	T	T	G	G	G	S	B		S	T	T	T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.				.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	A	L	S	S	Q	P	D	V	I	V	L	D	E	P	T	S	A	L	D	I	S	V	Q	A	Q	I	L	N	L	L	V	T	L	Q	E	N	H	G	L	T	Y	V	L	I	S	H	N	V	S	V	I	R	H	M	S	D	R	V	A	V	M	Y	L	G	Q	I	V	E	L	G	D	A	Q	Q	V	L	T
Query Conservation
Alig confidence																																								.	.															.
Template Conservation																																								.	.															.
Template Sequence		I	A	R	A	L	V	N	N	P	K	I	L	I	F	D	E	A	T	S	A	L	D	Y	E	S	E	H	V	I	M	R	N	M	H	K	I	C	K	.	.	G	R	T	V	I	I	I	A	H	R	L	S	T	V	.	K	N	A	D	R	I	I	V	M	E	K	G	K	I	V	E	Q	G	K	H	K	E	L	L	S
Template Known Secondary structure							T	T			S									S																			T	.	.	T	S							S	S	G	G	G	G	.	T	T	S	S							T	T
Template Predicted Secondary structure																																								.	.															.
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.			.	.	.	.	.	.	660	.	.	.	.	.	.	.		.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
		233	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	H	P	Y	T	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	E	S	L	Y	S	Y	L	Y
Template Known Secondary structure		S	T	T
Template Predicted Secondary structure
Template SS confidence
		693	.	.	.	.	.	.	700	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions