Return to main results Retrieve Phyre Job Id

Job DescriptionP77622
Confidence99.54%DateThu Jan 5 12:31:12 GMT 2012
Rank73Aligned Residues180
% Identity16%Templated1okkd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  RRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRR
Query Conservation    


  


 








  
 

     
 
   
       
 
     
 
   
                    
Alig confidence 















































































Template Conservation    
 
  
 
  






   
        
 
 
   
                                        
Template Sequence  PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQA
Template Known Secondary structure 
SSS
STTSSTTT





SSTTT




TT

Template Predicted Secondary structure 





























Template SS confidence 















































































   100.........110.........120.........130.........140.........150.........160.........170.........
 
   120.........130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  ALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLI
Query Conservation        
                



  


 

 

   
 











      
   
  
    
 


 
Alig confidence 









































.....
































Template Conservation                                            .....    
                         

 
Template Sequence  MKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEP. . . . . KEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIV
Template Known Secondary structure  T
S





TT

TT

.....STT

T

S
Template Predicted Secondary structure 












.....
















Template SS confidence 















































































   180.........190.........200.........210.........220. ........230.........240.........250....
 
   200.. .......210.........220....
Predicted Secondary structure 

.........





Query SS confidence 


. . . . . . . . .





















Query Sequence  SHN. . . . . . . . . VSVIRHMSDRVAVMYLGQIVEL
Query Conservation 


.........
       


 

  
 


 
Alig confidence 


.........





















Template Conservation 
  

                 
     

   
Template Sequence  TKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDD
Template Known Secondary structure 
TTSS


TT



SSSTT
Template Predicted Secondary structure 








Template SS confidence 

































   255....260.........270.........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions