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Job DescriptionP77622
Confidence100.00%DateThu Jan 5 12:31:12 GMT 2012
Rank19Aligned Residues233
% Identity27%Templatec2yz2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGS. .
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Template Sequence  MR. . . IEVVNVSHIFHRGTP. . . . . . LEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERK
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...TTTST......T

TT

STT

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   7980.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  . . . . . QRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAI
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Template Sequence  KGYEIRRNIGIAFQYPEDQFFAE. RVFDEVAFAVKNFYPDRDPVPLVKKAMEFVGLDFD. SFKDRVPFFLSGGEKRRVAI
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GGG
SSGGGG


S.S
TTS
T

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GGGS
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   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  ARALSSQPDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTA
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Template Sequence  ASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTL. GKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEK
Template Known Secondary structure  TT

SSTTTT

T.T

S
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   150.........160.........170.........180....... ..190.........200.........210.........220........
 
   234.....240.....
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Query Sequence  . . PAHPYTRLLLDS
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Template Sequence  YDPRFFTSKMLVMR
Template Known Secondary structure  S

TT

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   229230.........240..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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