Return to main results Retrieve Phyre Job Id

Job DescriptionP77622
Confidence100.00%DateThu Jan 5 12:31:12 GMT 2012
Rank29Aligned Residues206
% Identity29%Templatec2pcjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 





































...
Query SS confidence 












































































. . .
Query Sequence  TLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQR. . .
Query Conservation   

 
  
   
               

  


 
  


  


 








  
 

     
 
   
   ...
Alig confidence 











...........





















































...
Template Conservation    
 
  
    ...........     
  

  
  

   
 
 








  
 
   
  
 
   
  
   
Template Sequence  EILRAENIKKVI. . . . . . . . . . . RGYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYT
Template Known Secondary structure  ...........TTTT


TTS
TTSS

STT

TT
Template Predicted Secondary structure 
...........

























Template SS confidence 















































































   3......10.... .....20.........30.........40.........50.........60.........70.
 
   81........90.........100.........110.........120.........130.........140.........
Predicted Secondary structure  ...........

































Query SS confidence  . . . . . . . . . . .




































































Query Sequence  . . . . . . . . . . . IMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQ
Query Conservation  ...........    
 
     
 
   
                          
                



  
Alig confidence  ...........









..

















.




















.















Template Conservation              
    
   ..     

 
         .              
   

 .         

 
   
Template Sequence  NEKELSLLRNRKLGFVFQFHY. . LIPELTALENVIVPMLKM. GKPKKEAKERGEYLLSELGLG. DKLSRKPYELSGGEQQ
Template Known Secondary structure 

SS

..

TTS
T.T

TT
T.T
TT

GGGS
Template Predicted Secondary structure 







..






.





.




Template SS confidence 















































































   72.......80.........90.. .......100.........110 .........120.........130. ........140.......
 
   150.........160.........170.........180.........190.........200.........210.........220......
Predicted Secondary structure 

























Query SS confidence 












































































Query Sequence  RIAIARALSSQPDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGD
Query Conservation 

 

 

   
 











      
   
  
    
 


 




       


 

  
 


 
 
Alig confidence 









































.













.


















Template Conservation 

 




   
 






   

      
   
      .
  

  

     .   


  
  
 

   
Template Sequence  RVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEG. GTSIVMVTHERELA. ELTHRTLEMKDGKVVGEIT
Template Known Secondary structure  TT

SSTTTTS
T.T
S
.TTSSTT
Template Predicted Secondary structure 










.




.



Template SS confidence 












































































   148.150.........160.........170.........180......... 190.........200... ......210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions