Job Description P77622 Confidence 99.53% Date Thu Jan 5 12:31:12 GMT 2012 Rank 74 Aligned Residues 169 % Identity 15% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		28	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure										.																													.	.
Query SS confidence										.																													.	.
Query Sequence		H	V	H	A	I	N	G	I	.	D	L	Q	I	R	R	G	E	T	L	G	I	V	G	E	S	G	C	G	K	S	T	L	A	Q	L	L	M	.	.	G	M	L	Q	P	S	H	G	Q	Y	I	R	S	G	S	Q	R	I	M	Q	M	V	F	Q	D	P	L	S	S	L	N	P	R	L	P	V	W	R	I	I	T
Query Conservation										.																													.	.
Alig confidence										.																													.	.																																		.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		M	I	E	G	F	D	D	I	S	H	G	G	L	P	I	G	R	S	T	L	V	S	G	T	S	G	T	G	K	T	L	F	S	I	Q	F	L	Y	N	G	I	I	E	F	D	E	P	G	V	F	V	T	F	E	E	T	P	Q	D	I	I	K	N	A	R	S	F	G	W	D	L	A	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T					T	T	S	S			T	T	S							S	T	T	S	S																									S	S	S										G	G	G	T					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		E	P	L	W	I	A	K	R	S	S	E	Q	Q	R	R	A	L	A	E	E	L	A	V	Q	V	G	I	R	P	E	Y	L	D	R	L	P	H	A	F	S	G	G	Q	R	Q	R	I	A	I	A	R	A	L	S	S	Q	P	D	V	I	V	L	D	E	P	T	S	A	L	.	.	.	.	D	I	S	V	Q	A	Q
Query Conservation																																																																							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.																																									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	K	L	V	D	E	G	K	L	F	I	L	D	A	S	P	D	.	P	E	G	Q	E	V	V	G	G	F	D	L	S	A	L	I	E	R	I	N	Y	A	I	Q	K	Y	R	A	R	R	V	S	I	D	S	V	T	S	V	F	Q	Q	Y	D	A	S	S	V	V	R	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.					T	T	S										.	S	S			S			S	S																		T		S							S	T	T	T	S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
														96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		I	L	N	L	L	V	T	L	Q	E	N	H	G	L	T	Y	V	L	I	S	H	N	V	S	V	.	.	.	.	.	.	.	.	.	I	R	H	M	S	D	R	V	A	V	M	Y
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	F	R	L	V	A	R	L	K	Q	I	G	A	T	T	V	M	T	T	E	R	I	E	E	Y	G	P	I	A	R	Y	G	V	E	E	F	V	S	D	N	V	V	I	L	R
Template Known Secondary structure														T										S	S	S	S	S		S	S	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions