Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB8
Confidence99.36%DateThu Jan 5 11:25:50 GMT 2012
Rank152Aligned Residues218
% Identity13%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180...... ...190.........200.........210.
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Query Sequence  PTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSP. . . . RAKAPFIALNMAAIPKDLIESELFG
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Template Sequence  NLDEVTAQDHAVTVLKKTLKS. . ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN
Template Known Secondary structure  STTT

S

TTTT
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STTSSTTS
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TT
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   35....40.........50..... ....60.........70.........80.........90.........100.........110..
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  HEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEG
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Template Sequence  FARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET. . . . . . . . . . . YSGVTRFCLICNYV. . . . . . . T
Template Known Secondary structure  S





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TTGGGS
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   113......120.........130.........140.........150......... 160.........170... .
 
   292.......300.........310.........320.........330.........340.........350.........360.........370.
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Query Sequence  KFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMA
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Template Sequence  RIIDPLASQCSKFRFKALDASN. . . . . . . . . . . AIDRLRFISEQENVKCDDGVLERILDI. SAGDLRRGITLLQSASKGA
Template Known Secondary structure  GS
S




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   175....180.........190...... ...200.........210.........220... ......230.........240..
 
   372.......380.....
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Query Sequence  . . . . AGQEVLIQDLPGEL
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Template Sequence  QYLGDGKNITSTQVEELA
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   243......250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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