Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB8
Confidence99.39%DateThu Jan 5 11:25:50 GMT 2012
Rank150Aligned Residues222
% Identity20%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.... .....160.........170.........180.........190.........200.....
Predicted Secondary structure 







............
























Query SS confidence 
















. . . . . . . . . . . .


















































Query Sequence  TDIIGEAPAMQDVFRII. . . . . . . . . . . . GRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLI
Query Conservation    


 
  
  
   
............   
    



 

 



   
  

  
     


 
 
        
Alig confidence 
















............






























...
















Template Conservation    



  
   
   
                     


 







 


 

  
...                 
Template Sequence  QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . NAPFIKVEATKFTEVGY
Template Known Secondary structure  TT

S
TTSS







TTSS...T

GGGGSS

S
Template Predicted Secondary structure 



















...










Template SS confidence 















































































   15....20.........30.........40.........50.........60.........70.... .....80.........90.
 
   206...210.........220.........230.........240.... .....250.........260.........270...
Predicted Secondary structure 























............













Query SS confidence 






































. . . . . . . . . . . .




























Query Sequence  ESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDM. . . . . . . . . . . . PLDVQTRLLRVLADGQFYRVGGYAPVKVD
Query Conservation 
  


      
 
     
    
  


 
  
  
............    
  
   
                 
Alig confidence 












..























............




























Template Conservation               ..              
   

                       

  

               
Template Sequence  VGKEVDSIIRDLT. . DSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHI
Template Known Secondary structure  GGGSTT..TTTT


GGGGS

SS

SS

TT
TT
Template Predicted Secondary structure 
..


























Template SS confidence 















































































   92.......100.... .....110.........120.........130.........140.........150.........160.........
 
   274.....280.........290.........300.........310.........320.........330......... 340.........350
Predicted Secondary structure 























...


Query SS confidence 

































































. . .










Query Sequence  VRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKL. . . LHPETEAALTR
Query Conservation   


  
   
        
   
  

    
 






  

  
    
             ...    
   
  
Alig confidence 









....



















































...










Template Conservation    
       ....            
                 
       
                     
  
  
Template Sequence  LFIASGAFQV. . . . ARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAE
Template Known Secondary structure 

SS....S
GGGS
T






SSTT
TT

Template Predicted Secondary structure 


....























Template SS confidence 















































































   304.....310... ......320.........330.........340.........350.........360.........370.........
 
   351...... ..360........
Predicted Secondary structure 





.......
Query SS confidence 






. . . . . . .










Query Sequence  LAWPGNV. . . . . . . RQLENTCRWLT
Query Conservation 
 




....... 

   
    
Alig confidence 






.......










Template Conservation                
 
   
    
Template Sequence  AAFRVNEKTENIGARRLHTVMERLM
Template Known Secondary structure  S


TTS
Template Predicted Secondary structure 










Template SS confidence 
























   380.........390.........400....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions