Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB8
Confidence99.66%DateThu Jan 5 11:25:50 GMT 2012
Rank125Aligned Residues205
% Identity19%Templated1l8qa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........ 140... ......150.........160.........170.........180.........190.........200.......
Predicted Secondary structure 








.



..


























Query SS confidence 








.



. .































































Query Sequence  VQLNGPTTD. IIGE. . APAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIES
Query Conservation           .


 ..
  
  
   
   
    



 

 



   
  

  
     


 
 
        
 
Alig confidence 








.



..































































Template Conservation 
    

   


  
                    


 







 

 


                         
Template Sequence  LNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAXVEH
Template Known Secondary structure 

TT

SSS



TTTTTTTS
SS
SSSSSTT

Template Predicted Secondary structure 


























Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   208.210.........220.........230.........240.... .....250.........260.........270.........280.....
Predicted Secondary structure 























..


















Query SS confidence 




































. .








































Query Sequence  ELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDM. . PLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLE
Query Conservation   


      
 
     
    
  


 
  
  
..    
  
   
                  


  
   
 
Alig confidence 








..........

















..













..........
















Template Conservation           ..........        

 



                   ..........        
        
Template Sequence  LKKGTINEF. . . . . . . . . . RNXYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT. . . . . . . . . . LYLLEKQIILASDRHPQ
Template Known Secondary structure  T
..........T
S
GGGGTT
..........TT
SS
GG
Template Predicted Secondary structure  ..........








..........






Template SS confidence 















































































   159160....... ..170.........180.........190.........200. ........210........
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  QRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCR
Query Conservation         
   
  

    
 






  

  
    
                 
   
  
 




 

   
 
Alig confidence 














..















.......










...











..











Template Conservation             
   ..               
.......
          ...
    
  

  ..  
 
 
   
 
Template Sequence  KLDGVSDRLVSRFEG. . GILVEIELDNKTRFKI. . . . . . . IKEKLKEFNLE. . . LRKEVIDYLLEN. . TKNVREIEGKIK
Template Known Secondary structure  G
TTS
T..S



.......TT

...

..
SS
Template Predicted Secondary structure  ..





.......


...


..


Template SS confidence 















































































   219220.........230... ......240......... 250.........260 .........270.. .......280....
 
   366...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  WLTV
Query Conservation      
Alig confidence 



Template Conservation   
  
Template Sequence  LIKL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   285...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions