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Job DescriptionP0AFB8
Confidence98.85%DateThu Jan 5 11:25:50 GMT 2012
Rank190Aligned Residues210
% Identity25%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150........ .160.........170.........180.........190.........200.....
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Query Sequence  PTTDIIGEAPAMQDVFRIIGRLS. . . . . . . . . . RSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLI
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Template Sequence  TFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE. . . ARVPFITASG. . . . . . . .
Template Known Secondary structure 
GGG

S

TT



S

TTSS...TT

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   154.....160.........170.........180.........190.........200.........210.. .......220..
 
   206...210.........220.........230.........240......... 250.........260.........270.........280
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Query Sequence  ESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQ. . . . . TRLLRVLADGQFYRVGGYAPVKVDVRIIAAT
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Template Sequence  . SDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDG. . . . . . . . . FEKDTAIVVMAAT
Template Known Secondary structure  .S
TTTTSSST

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TT

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   223......230.........240.........250.........260.........270......... 280.........290..
 
   281.. ......290.........300.........310.........320.........330.........340.........350.......
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Query Sequence  HQN. . . LEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNV
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Template Sequence  NRPDILDPALLRPGRFDR. . . . . . . QIAIDAPDVKGREQ. . . . ILRIHA. . . . . . . . RGKPLAEDVDLALLAKRTPGFVG
Template Known Secondary structure  S
GGGS
GGGGSTTSS
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S

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B
TT

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TT

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   302.......310......... 320.........330... ...... 340.........350.........360..
 
   358.360.........370. ........380.....
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Query Sequence  RQLENTCRWLTVMA. . . AGQEVLIQDLPGEL
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Template Sequence  ADLENLLNEAALLAAREGRRKITMKDLEEAA
Template Known Secondary structure  TT
SSB
T
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   363......370.........380.........390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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