Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB8
Confidence99.35%DateThu Jan 5 11:25:50 GMT 2012
Rank154Aligned Residues195
% Identity17%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150....... ..160.........170.........180.........190.........200.........
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Query Sequence  TDIIGEAPAMQDVFRIIGRL. . . . . . . . SRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESEL
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Template Sequence  NGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES. . . NFPFIKICSPDKMIGFSETAK
Template Known Secondary structure  T




S
SS
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STTSS...T
S
GGG
TT

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   513......520.........530.........540.........550.........560........ .570.........580.........
 
   210.........220.........230.........240.... .....250.........260.........270.........
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Query Sequence  FGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDM. . . . . . . . . . PLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAA
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Template Sequence  CQAMKKIFD. . . . . . . . DAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKK. . . . . . . . . . APPQGRKLLII
Template Known Secondary structure  ........TSS

TT
BTTTTB

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   590........ .600.........610.........620.........630.........640 .........650.
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  THQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQ
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Template Sequence  GTTSRKDVLQEMEMLNAF. . . . . STTIHVPNIATGEQ. . . . . . . . . LLEALELLGNFKDKERTTIAQQVKGKKVWIGIKK
Template Known Secondary structure  S
TT
TTTS.....S


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   652.......660......... 670.........680... ......690.........700.........710.......
 
   360.......
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Query Sequence  LENTCRWL
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Template Sequence  LLMLIEMS
Template Known Secondary structure 
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   718.720.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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