Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB8
Confidence92.54%DateThu Jan 5 11:25:50 GMT 2012
Rank323Aligned Residues116
% Identity16%Templated1a1va1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.........200....... ..210.........220.....
Predicted Secondary structure 
























..















.........
Query SS confidence 


















































. .

















. . . . . . . . .
Query Sequence  LSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIES. . ELFGHEKGAFTGANTIRQ. . . . . . . . .
Query Conservation   
    



 

 



   
  

  
     


 
 
        
 .. 


      
 
     .........
Alig confidence 





















..


























..

















.........
Template Conservation          

 







   ..           

  

  
  
                                 
Template Sequence  VPQSFQVAHLHAPTGSGKSTKV. . PAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTY
Template Known Secondary structure 

SS


TTS
TTT..TTT

S
S



SS




S
Template Predicted Secondary structure 








..


















Template SS confidence 















































































   193......200.........210.... .....220.........230.........240.........250.........260.........270
 
   226...230.........240.........250.........260.........270.........280...
Predicted Secondary structure  .....


























Query SS confidence  . . . . .

























































Query Sequence  . . . . . GRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQN
Query Conservation  .....
    
  


 
  
  
    
  
   
                  


  
   
Alig confidence  .....
































.........















Template Conservation           
     




 
            
   .........         
  



Template Sequence  GKFLADGGSGGAYDIIICDECHSTDATSILGIGTVLDQ. . . . . . . . . AETAGARLVVLATATP
Template Known Secondary structure  TT





STTT

S.........TTTTT
SS

Template Predicted Secondary structure 















.........







Template SS confidence 






























































   271........280.........290.........300........ .310.........320....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions