Job Description P0AFB8 Confidence 99.09% Date Thu Jan 5 11:25:50 GMT 2012 Rank 170 Aligned Residues 214 % Identity 23% Template c3hu2C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs Resolution 2.85 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.												.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	T	D	I	I	G	E	A	P	A	M	Q	D	V	F	R	I	I	G	R	.	.	.	.	.	.	.	.	.	.	.	L	S	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	P	K	D	L
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																																																														.	.	.
Template Sequence		G	Y	D	D	I	G	G	C	R	K	Q	L	A	Q	I	K	E	M	V	E	L	P	L	R	H	P	A	L	F	K	A	I	G	V	K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	.	.	.	T	G	A	F	F	F	L	I	N	G	P	E	I	M	S	K	L
Template Known Secondary structure			G	G	G			S												T														T												S	T	T	S	S												.	.	.		S	S												T	S
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	S	E	L	F	G	H	E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	.	.	.	D	G	G	T	L	F	L	D	E	I	G	D	M	P	L	D	.	.	.	.	.	.	.	.	.	.	.	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	V	G	G	Y	A	P	V
Query Conservation																													.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template Sequence		A	G	E	S	.	.	.	.	.	.	.	.	.	.	.	.	E	S	N	L	R	K	A	F	E	E	A	E	K	N	A	P	A	I	I	F	I	D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	.	.	.	.	.	.	.	.	.	L	K	Q
Template Known Secondary structure		T	T			.	.	.	.	.	.	.	.	.	.	.	.														S	S	S							S	G	G	G	T		B		S	S	S																				.	.	.	.	.	.	.	.	.	S		G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.													.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.										.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		K	V	D	V	R	I	I	A	A	T	H	Q	N	.	.	.	L	E	Q	R	V	Q	E	G	K	F	R	E	D	L	F	H	R	L	N	V	I	R	V	H	L	P	P	L	R	E	R	R	E	D	I	P	R	L	A	R	H	F	L	Q	V	A	A	R	E	L	G	V	E	A	K	L	L	H	P	E	T	E	A	A
Query Conservation															.	.	.
Alig confidence															.	.	.													.	.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.	.
Template Sequence		R	A	H	V	I	V	M	A	A	T	N	R	P	N	S	I	D	P	A	L	R	R	F	G	R	F	D	R	.	.	.	.	.	.	.	E	V	D	I	G	I	P	D	A	T	G	R	L	E	.	.	.	.	I	L	Q	I	H	T	.	.	.	.	.	.	.	.	K	N	M	K	L	A	D	D	V	D	L	E	Q
Template Known Secondary structure		G	G									S		G	G	G	B		G	G	G	G	S	T	T	S	S			.	.	.	.	.	.	.															.	.	.	.						S	.	.	.	.	.	.	.	.	T	T	S		B		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.															.	.	.	.							.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.								.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.									.	.	.	.	390	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.																					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	R	L	A	W	P	G	N	V	R	Q	L	E	N	T	C	R	W	L	T	V	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Q	E	V	L	I	Q	D	L	P	G	E	L	F	E	S	T	V	A	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	N	E	T	H	G	H	V	G	A	D	L	A	A	L	C	S	E	A	A	L	Q	A	I	R	K	K	M	D	L	I	D	L	E	D	E	T	I	D	A	E	V	M	N	S	L	A	V	T	M	D	D	F	R	W	A	L	S	Q	S	N	P	S	A
Template Known Secondary structure							T	T																					T	T	T	S			T	T	S	S	S											B
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions