Job Description P0AFB8 Confidence 99.52% Date Thu Jan 5 11:25:50 GMT 2012 Rank 139 Aligned Residues 219 % Identity 19% Template c3hteC_ PDB info PDB header:motor protein Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: crystal structure of nucleotide-free hexameric clpx Resolution 4.03 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																				.	.	.	.																																														.
Query SS confidence																				.	.	.	.																																														.
Query Sequence		T	D	I	I	G	E	A	P	A	M	Q	D	V	F	R	I	I	G	.	.	.	.	R	L	S	R	S	S	I	S	V	L	I	N	G	E	S	G	T	G	K	E	L	V	A	H	A	L	H	R	H	S	P	R	A	K	A	P	F	I	A	L	N	M	A	A	I	.	P	K	D	L	I	E	S	E	L	F	G	H
Query Conservation																				.	.	.	.																																														.
Alig confidence																				.	.	.	.																															.	.	.													.
Template Conservation																																																						.	.	.
Template Sequence		D	Y	V	I	G	Q	E	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	.	.	.	D	V	P	F	T	M	A	D	A	T	T	L	E	D	V	E	N	I	I	Q	K	L	L	Q	K
Template Known Secondary structure		T	T	S		S																																T	T	S	S											T	T	.	.	.	T								G	G	G			T	T	T									T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.										.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																		.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		E	K	G	A	F	T	G	A	N	T	I	R	Q	G	R	F	E	Q	A	D	G	G	T	L	F	L	D	E	I	G	D	M	.	.	P	L	D	V	Q	T	R	L	L	R	V	L	A	D	G	Q	F	Y	R	.	.	.	.	.	.	.	.	.	V	G	G	Y	A	P	V	K	V	D	V	R	I	I	A	A	T	H
Query Conservation																																		.	.																				.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																			.	.																				.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	D	Y	.	.	.	.	.	.	.	.	.	.	.	D	V	Q	K	A	Q	R	G	I	V	Y	I	D	Q	I	D	K	I	S	R	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D	K	V	I	S	H	R	V	S	E	G	E	L	L	A
Template Known Secondary structure		T	T	T	.	.	.	.	.	.	.	.	.	.	.							T								G	G	G	G																			T	T	S	S									T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.												.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.																																					.
Query SS confidence																																									.	.	.	.																																					.
Query Sequence		Q	N	L	E	Q	R	V	Q	E	G	K	F	R	E	D	L	F	H	R	L	N	V	I	R	V	H	L	P	P	L	R	E	R	R	E	D	I	P	R	.	.	.	.	L	A	R	H	F	L	Q	V	A	A	R	E	L	G	V	E	A	K	L	L	H	P	E	T	E	A	A	L	T	R	L	A	W	P	G	N	.
Query Conservation																																									.	.	.	.																																					.
Alig confidence																																									.	.	.	.																		.																			.
Template Conservation																																																														.
Template Sequence		Q	V	E	P	E	D	L	I	K	F	G	L	I	P	E	F	I	G	R	L	P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	.	E	F	R	D	E	A	L	D	A	I	A	K	K	A	M	A	R	K	T
Template Known Secondary structure		T										T							T	T									S												S	S	T	T													T	T				.																	T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
			357	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	R	Q	L	E	N	T	C	R	W	L	T	V	M	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	A	R	G	L	R	S	I	V	E	A	A	L	L	D	T
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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